RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA674308" and tax_phylum = "Candidatus Calescibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Calescibacteriota · 1 ✖

tax_clade 1

bioproject 1

  • PRJNA674308 · 1 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25393208 25393208 PRJNA674308_P_NODE_5620_length_400_cov_2.957265_g5385_i0 PRJNA674308 5620 400 2.957265 11.82906 Candidatus Calescibacterium sp. 2972667 Bacteria Bacteria 130 1.1499999999999999e-32   NR MCS7213355.1 2972667 g5385 i0 64.6 12.7275 99 34 74.3 1 3 299 89 186 MCS7213355.1 F0F1 ATP synthase subunit alpha [Candidatus Calescibacterium sp.] diamond 5091 130 1 Bacteria Bacteria candidate phyla   Candidatus Calescibacteriota       Candidatus Calescibacterium Candidatus Calescibacterium sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;