RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

25,227 rows where bioproject = "PRJNA674308"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_phylum >10

tax_superkingdom 4

analysis 2

bioproject 1

  • PRJNA674308 · 25,227 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
644471 644471 PRJNA674308_P_NODE_10181_length_299_cov_1.240000_g9946_i0 PRJNA674308 10181 299 1.24 3.7076 Mus musculus 10090 Chordata Chordata 551 2.2499999999999998e-152   NTclustered gi|1907086038|ref|XR_003949988.2| 10090 g9946 i0 100 99.5685618729097 298 0 99 0 1 298 2579 2876 PREDICTED: Mus musculus kinesin light chain 1 (Klc1), transcript variant X8, misc_RNA blastn 29771 551 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
644472 644472 PRJNA674308_P_NODE_101_length_2471_cov_2.933526_g82_i0 PRJNA674308 101 2471 2.933526 72.48742746 Ochromonadaceae sp. CCMP2298 483371 SAR_Eukaryotes SAR_Eukaryotes 968 0   NR KAJ1415647.1 483371 g82 i0 79.4 0.777013354917038 640 130 77.5 1 2440 527 40 679 KAJ1415647.1 vacuolar membrane proton pump, inorganic pyrophosphatase [Ochromonadaceae sp. CCMP2298] diamond 1920 968 1 Eukaryota Sar     Synurophyceae Ochromonadales Ochromonadaceae   Ochromonadaceae sp. CCMP2298
644473 644473 PRJNA674308_P_NODE_10381_length_296_cov_1.684211_g10146_i0 PRJNA674308 10381 296 1.684211 4.98526456 Mus musculus 10090 Chordata Chordata 547 2.8799999999999986e-151   NTclustered gi|407027869|ref|NM_001199275.2| 10090 g10146 i0 100 92.9087837837838 296 0 100 0 1 296 2979 2684 Mus musculus TNFAIP3 interacting protein 1 (Tnip1), transcript variant 2, mRNA blastn 27501 547 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
644474 644474 PRJNA674308_P_NODE_10461_length_295_cov_1.691057_g10226_i0 PRJNA674308 10461 295 1.691057 4.98861815 Mus musculus 10090 Chordata Chordata 542 1.33e-149   NTclustered gi|73853595|gb|AC165163.2| 10090 g10226 i0 100 46.7966101694915 293 0 99 0 3 295 144892 145184 Mus musculus BAC clone RP23-146B12 from chromosome 14, complete sequence blastn 13805 542 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
644475 644475 PRJNA674308_P_NODE_10541_length_294_cov_1.273469_g10306_i0 PRJNA674308 10541 294 1.273469 3.74399886 Mus musculus 10090 Chordata Chordata 544 3.69e-150   NTclustered gi|84872373|gb|AC171917.14| 10090 g10306 i0 100 46.6156462585034 294 0 100 0 1 294 112251 112544 Mus musculus chromosome 8, clone RP23-390K13, complete sequence blastn 13705 544 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
644476 644476 PRJNA674308_P_NODE_10741_length_291_cov_3.235537_g10506_i0 PRJNA674308 10741 291 3.235537 9.41541267 Ochromonadaceae sp. CCMP2298 483371 SAR_Eukaryotes SAR_Eukaryotes 153 8.35e-41   NR KAJ1426759.1 483371 g10506 i0 73.2 2 97 26 100 0 1 291 112 208 KAJ1426759.1 tRNA synthetases class I-domain-containing protein [Ochromonadaceae sp. CCMP2298] diamond 582 153 1 Eukaryota Sar     Synurophyceae Ochromonadales Ochromonadaceae   Ochromonadaceae sp. CCMP2298
644477 644477 PRJNA674308_P_NODE_1081_length_964_cov_2.273224_g925_i0 PRJNA674308 1081 964 2.273224 21.91387936 Aquirufa lenticrescens 2696560 Bacteria Bacteria 660 0   NTclustered gi|2091518249|gb|CP049834.1| 2696560 g925 i0 80.524 6.47821576763485 878 156 91 14 66 939 1555980 1556846 Aquirufa lenticrescens strain 9H-EGSE chromosome, complete genome blastn 6245 660 1 Bacteria FCB group Pseudomonadati Bacteroidota Cytophagia Cytophagales Flectobacillaceae Aquirufa Aquirufa lenticrescens
644478 644478 PRJNA674308_P_NODE_10821_length_290_cov_3.107884_g10586_i0 PRJNA674308 10821 290 3.107884 9.0128636 Madurella fahalii 1157608 Fungi Fungi 503 6.17e-138   NTclustered gi|2897801775|ref|XR_011605963.1| 1157608 g10586 i0 97.931 99.8620689655172 290 6 100 0 1 290 2447 2158 Madurella fahalii 28S ribosomal RNA (MP_IFM68171_r21), rRNA blastn 28960 503 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Sordariales   Madurella Madurella fahalii
644479 644479 PRJNA674308_P_NODE_10861_length_290_cov_1.510373_g10626_i0 PRJNA674308 10861 290 1.510373 4.3800817 Hordeum vulgare 4513 Plants Plants 536 6.079999999999999e-148   NTclustered gi|326517303|dbj|AK368815.1| 112509 g10626 i0 100 1 290 0 100 0 1 290 2984 2695 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2080H01 blastn 290 536 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Hordeum Hordeum vulgare
644480 644480 PRJNA674308_P_NODE_10881_length_290_cov_1.078838_g10646_i0 PRJNA674308 10881 290 1.078838 3.1286302 Mus musculus 10090 Chordata Chordata 534 2.19e-147   NTclustered gi|72679875|gb|BC100392.1| 10090 g10646 i0 100 44.0241379310345 289 0 99 0 2 290 2292 2004 Mus musculus nucleolar and spindle associated protein 1, mRNA (cDNA clone MGC:118032 IMAGE:30110191), complete cds blastn 12767 534 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
644481 644481 PRJNA674308_P_NODE_11061_length_287_cov_3.025210_g10826_i0 PRJNA674308 11061 287 3.02521 8.6823527 Mus musculus 10090 Chordata Chordata 531 2.799999999999999e-146   NTclustered gi|1840394204|ref|NM_001382480.1| 10090 g10826 i0 100 77.9198606271777 287 0 100 0 1 287 2198 1912 Mus musculus AKT1 substrate 1 (Akt1s1), transcript variant 5, mRNA blastn 22363 531 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
644482 644482 PRJNA674308_P_NODE_11081_length_287_cov_1.747899_g10846_i0 PRJNA674308 11081 287 1.747899 5.01647013 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 150 6.22e-41   NR XP_004341068.1 1257118 g10846 i0 74.7 32.6655052264808 95 23 99.3 1 2 286 22 115 XP_004341068.1 polyadenylate-binding protein family protein [Acanthamoeba castellanii str. Neff] diamond 9375 150 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
644483 644483 PRJNA674308_P_NODE_11341_length_283_cov_8.534188_g11106_i0 PRJNA674308 11341 283 8.534188 24.15175204 Corynebacterium jeddahense 1414719 Bacteria Bacteria 462 1.02e-125   NTclustered gi|2443262567|gb|CP063194.1| 1414719 g11106 i0 96.454 407.063604240283 282 7 100 2 1 280 678156 678436 Corynebacterium jeddahense strain DSM 45997 chromosome, complete genome blastn 115199 462 1 Bacteria   Bacillati Actinomycetota Actinomycetes Mycobacteriales Corynebacteriaceae Corynebacterium Corynebacterium jeddahense
644484 644484 PRJNA674308_P_NODE_11441_length_282_cov_2.094421_g11206_i0 PRJNA674308 11441 282 2.094421 5.90626722 uncultured fungus 175245 Fungi Fungi 499 7.729999999999999e-137   NTclustered gi|2159202898|emb|OU941326.1| 175245 g11206 i0 98.582 78.1312056737589 282 4 100 0 1 282 669 950 uncultured fungus genomic DNA sequence contains 18S rRNA gene, ITS1, 5.8S rRNA gene, ITS2, 28S rRNA gene, isolate consensus02618 blastn 22033 499 1 Eukaryota Opisthokonta Fungi           uncultured fungus
644485 644485 PRJNA674308_P_NODE_11701_length_280_cov_0.900433_g11466_i0 PRJNA674308 11701 280 0.900433 2.5212124 Naegleria lovaniensis 51637 Heterolobosea other_Eukaryota 324 4.9499999999999995e-84   NTclustered gi|2124399684|ref|XM_044698812.1| 51637 g11466 i0 87.544 3.01071428571429 281 33 100 2 1 280 495 774 Naegleria lovaniensis uncharacterized protein (C9374_008706), partial mRNA blastn 843 324 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis
644486 644486 PRJNA674308_P_NODE_12121_length_275_cov_2.101770_g11886_i0 PRJNA674308 12121 275 2.10177 5.7798675 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 412 1.0099999999999997e-110   NTclustered gi|290977317|ref|XM_002671339.1| 5762 g11886 i0 93.796 0.996363636363636 274 17 99 0 2 275 1538 1265 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_59485), mRNA blastn 274 412 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
644487 644487 PRJNA674308_P_NODE_12161_length_275_cov_1.380531_g11926_i0 PRJNA674308 12161 275 1.380531 3.79646025 Mus musculus 10090 Chordata Chordata 508 1.2499999999999999e-139   NTclustered gi|74186751|dbj|AK159115.1| 10090 g11926 i0 100 101.567272727273 275 0 100 0 1 275 724 998 Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420002F23 product:sorting nexin 5, full insert sequence blastn 27931 508 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
644488 644488 PRJNA674308_P_NODE_12301_length_273_cov_27.937500_g12066_i0 PRJNA674308 12301 273 27.9375 76.269375 Flavobacterium psychrotrophum 2294119 Bacteria Bacteria 106 1.9e-18   NTclustered gi|1450364207|gb|CP031557.1| 2294119 g12066 i0 89.286 6.25274725274725 84 9 31 0 190 273 4767383 4767300 Flavobacterium psychrotrophum strain CJ74 chromosome, complete genome blastn 1707 106 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Flavobacterium Flavobacterium psychrotrophum
644489 644489 PRJNA674308_P_NODE_12621_length_270_cov_1.203620_g12386_i0 PRJNA674308 12621 270 1.20362 3.249774 Mus musculus 10090 Chordata Chordata 477 3.4499999999999986e-130   NTclustered gi|2499882675|ref|NR_185168.1| 10090 g12386 i0 98.519 55.9185185185185 270 4 100 0 1 270 2049 1780 Mus musculus TBC1 domain family, member 17 (Tbc1d17), transcript variant 11, non-coding RNA blastn 15098 477 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
644490 644490 PRJNA674308_P_NODE_12681_length_269_cov_1.881818_g12446_i0 PRJNA674308 12681 269 1.881818 5.06209042 Emticicia oligotrophica 312279 Bacteria Bacteria 255 1.75e-63   NTclustered gi|387853393|gb|CP002961.1| 929562 g12446 i0 83.895 66.5278810408922 267 43 99 0 2 268 4120075 4120341 Emticicia oligotrophica DSM 17448, complete genome blastn 17896 255 1 Bacteria FCB group Pseudomonadati Bacteroidota Cytophagia Cytophagales Leadbetterellaceae Emticicia Emticicia oligotrophica
644491 644491 PRJNA674308_P_NODE_13041_length_266_cov_1.198157_g12806_i0 PRJNA674308 13041 266 1.198157 3.18709762 Mus musculus 10090 Chordata Chordata 492 1.2099999999999999e-134   NTclustered gi|93102408|ref|NM_007988.3| 10090 g12806 i0 100 49.9661654135338 266 0 100 0 1 266 8212 7947 Mus musculus fatty acid synthase (Fasn), mRNA blastn 13291 492 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
644492 644492 PRJNA674308_P_NODE_13161_length_265_cov_1.013889_g12926_i0 PRJNA674308 13161 265 1.013889 2.68680585 Mus musculus 10090 Chordata Chordata 484 2.0199999999999998e-132   NTclustered gi|1720394317|ref|XM_006531612.4| 10090 g12926 i0 99.623 101.094339622642 265 1 100 0 1 265 6616 6880 PREDICTED: Mus musculus pecanex homolog 3 (Pcnx3), transcript variant X1, mRNA blastn 26790 484 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
644493 644493 PRJNA674308_P_NODE_1321_length_867_cov_3.090465_g1146_i0 PRJNA674308 1321 867 3.090465 26.79433155 Ochromonadaceae sp. CCMP2298 483371 SAR_Eukaryotes SAR_Eukaryotes 392 1.2499999999999996e-134   NR KAJ1434709.1 483371 g1146 i0 74.5 0.948096885813149 274 70 94.8 0 2 823 2 275 KAJ1434709.1 prohibitin complex subunit 1 [Ochromonadaceae sp. CCMP2298] diamond 822 392 1 Eukaryota Sar     Synurophyceae Ochromonadales Ochromonadaceae   Ochromonadaceae sp. CCMP2298
644494 644494 PRJNA674308_P_NODE_13361_length_263_cov_1.457944_g13126_i0 PRJNA674308 13361 263 1.457944 3.83439272 Mus musculus 10090 Chordata Chordata 486 5.5499999999999986e-133   NTclustered gi|52077807|gb|AC120413.20| 10090 g13126 i0 100 100.285171102662 263 0 100 0 1 263 26893 26631 Mus musculus chromosome 5, clone RP24-458L16, complete sequence blastn 26375 486 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
644495 644495 PRJNA674308_P_NODE_13401_length_263_cov_0.897196_g13166_i0 PRJNA674308 13401 263 0.897196 2.35962548 Staphylococcus epidermidis 1282 Bacteria Bacteria 486 5.5499999999999986e-133   NTclustered gi|2219585795|gb|CP094859.1| 1282 g13166 i0 100 100 263 0 100 0 1 263 2095788 2095526 Staphylococcus epidermidis strain C99 chromosome, complete genome blastn 26300 486 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Staphylococcaceae Staphylococcus Staphylococcus epidermidis
644496 644496 PRJNA674308_P_NODE_13521_length_261_cov_3.938679_g13286_i0 PRJNA674308 13521 261 3.938679 10.27995219 Mus musculus 10090 Chordata Chordata 483 7.12e-132   NTclustered gi|23272245|gb|BC023887.1| 10090 g13286 i0 100 41.7241379310345 261 0 100 0 1 261 1277 1537 Mus musculus neural proliferation, differentiation and control gene 1, mRNA (cDNA clone MGC:38033 IMAGE:5151868), complete cds blastn 10890 483 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
644497 644497 PRJNA674308_P_NODE_13601_length_261_cov_1.226415_g13366_i0 PRJNA674308 13601 261 1.226415 3.20094315 Uloborus diversus 327109 Arthropoda Arthropoda 174 4.87e-39   NTclustered gi|2473953261|ref|XM_054852565.1| 327109 g13366 i0 82.178 8.45977011494253 202 36 77 0 32 233 909 1110 PREDICTED: Uloborus diversus UDP-glucose 4-epimerase-like (LOC129218330), mRNA blastn 2208 174 1 Eukaryota Opisthokonta Metazoa Arthropoda Arachnida Araneae Uloboridae Uloborus Uloborus diversus
644498 644498 PRJNA674308_P_NODE_13701_length_260_cov_1.350711_g13466_i0 PRJNA674308 13701 260 1.350711 3.5118486 Flectobacillus longus 2984207 Bacteria Bacteria 172 1.61e-50   NR WP_283326067.1 2984207 g13466 i0 100 0.992307692307692 86 0 99.2 0 258 1 80 165 WP_283326067.1 cysteine desulfurase family protein [Flectobacillus longus] diamond 258 172 1 Bacteria FCB group Pseudomonadati Bacteroidota Cytophagia Cytophagales Flectobacillaceae Flectobacillus Flectobacillus longus
644499 644499 PRJNA674308_P_NODE_13741_length_259_cov_3.466667_g13506_i0 PRJNA674308 13741 259 3.466667 8.97866753 Flavobacterium psychrotrophum 2294119 Bacteria Bacteria 350 7.47e-92   NTclustered gi|1450364207|gb|CP031557.1| 2294119 g13506 i0 90.943 86.1698841698842 265 17 100 5 1 259 2670574 2670837 Flavobacterium psychrotrophum strain CJ74 chromosome, complete genome blastn 22318 350 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Flavobacterium Flavobacterium psychrotrophum
644500 644500 PRJNA674308_P_NODE_13841_length_259_cov_0.990476_g13606_i0 PRJNA674308 13841 259 0.990476 2.56533284 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 351 2.08e-92   NTclustered gi|290979674|ref|XM_002672513.1| 5762 g13606 i0 91.12 1 259 23 100 0 1 259 879 621 Naegleria gruberi viral A-type inclusion protein (NAEGRDRAFT_81225), mRNA blastn 259 351 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
644501 644501 PRJNA674308_P_NODE_13941_length_258_cov_1.244019_g13706_i0 PRJNA674308 13941 258 1.244019 3.20956902 Micrococcus luteus 1270 Bacteria Bacteria 477 3.2699999999999985e-130   NTclustered gi|1949953231|gb|CP066288.1| 1270 g13706 i0 100 53.4263565891473 258 0 100 0 1 258 677295 677038 Micrococcus luteus strain FDAARGOS_1034 chromosome blastn 13784 477 1 Bacteria   Bacillati Actinomycetota Actinomycetes Micrococcales Micrococcaceae Micrococcus Micrococcus luteus
644502 644502 PRJNA674308_P_NODE_14001_length_257_cov_2.701923_g13766_i0 PRJNA674308 14001 257 2.701923 6.94394211 Pseudomonas sp. FP453 2954094 Bacteria Bacteria 52.8 0.023   NTclustered gi|2559240415|gb|CP117435.1| 2954094 g13766 i0 90.244 0.159533073929961 41 2 16 1 5 45 6010409 6010447 Pseudomonas sp. FP453 chromosome, complete genome blastn 41 52.8 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Pseudomonadales Pseudomonadaceae Pseudomonas Pseudomonas sp. FP453
644503 644503 PRJNA674308_P_NODE_14061_length_257_cov_1.250000_g13826_i0 PRJNA674308 14061 257 1.25 3.2125 Mus musculus 10090 Chordata Chordata 473 4.2099999999999996e-129   NTclustered gi|654821729|ref|NM_001293689.1| 10090 g13826 i0 100 13.4241245136187 256 0 99 0 2 257 5817 6072 Mus musculus solute carrier family 6 (neurotransmitter transporter), member 17 (Slc6a17), transcript variant 1, mRNA blastn 3450 473 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
644504 644504 PRJNA674308_P_NODE_14081_length_257_cov_0.865385_g13846_i0 PRJNA674308 14081 257 0.865385 2.22403945 Oomycota 4762 SAR_Eukaryotes SAR_Eukaryotes 124 9.289999999999998e-31   NR XP_012208269.1 695850 g13846 i0 65.9 4.94941634241245 85 29 99.2 0 3 257 3558 3642 XP_012208269.1 hypothetical protein SPRG_13945 [Saprolegnia parasitica CBS 223.65] diamond 1272 124 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Saprolegniaceae Saprolegnia Saprolegnia parasitica
644505 644505 PRJNA674308_P_NODE_14141_length_256_cov_1.507246_g13906_i0 PRJNA674308 14141 256 1.507246 3.85854976 Flectobacillus 101 Bacteria Bacteria 183 8.69e-58   NR WP_095162818.1 976 g13906 i0 100 1.9921875 85 0 99.6 0 256 2 7 91 WP_095162818.1 MULTISPECIES: 6-pyruvoyl trahydropterin synthase family protein [Bacteroidota] diamond 510 183 1 Bacteria FCB group Pseudomonadati Bacteroidota          
644506 644506 PRJNA674308_P_NODE_14281_length_255_cov_1.320388_g14046_i0 PRJNA674308 14281 255 1.320388 3.3669894 Mus musculus 10090 Chordata Chordata 470 5.4e-128   NTclustered gi|20068450|emb|AL589878.12| 10090 g14046 i0 100 52.4235294117647 254 0 99 0 2 255 93217 92964 Mouse DNA sequence from clone RP23-351C7 on chromosome 17, complete sequence blastn 13368 470 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
644507 644507 PRJNA674308_P_NODE_1441_length_835_cov_2.511450_g1258_i0 PRJNA674308 1441 835 2.51145 20.9706075 Mus musculus 10090 Chordata Chordata 1461 0   NTclustered gi|74139967|dbj|AK153226.1| 10090 g1258 i0 98.208 28.4694610778443 837 13 100 1 1 835 998 1834 Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830128F04 product:interferon-induced protein with tetratricopeptide repeats 3, full insert sequence blastn 23772 1461 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
644508 644508 PRJNA674308_P_NODE_14461_length_253_cov_3.549020_g14226_i0 PRJNA674308 14461 253 3.54902 8.9790206 Mus musculus 10090 Chordata Chordata 468 1.92e-127   NTclustered gi|354796481|gb|JN960982.1| 10090 g14226 i0 100 103.936758893281 253 0 100 0 1 253 29250 29502 Mus musculus targeted KO-first, conditional ready, lacZ-tagged mutant allele Rhoa:tm1a(EUCOMM)Wtsi; transgenic blastn 26296 468 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
644509 644509 PRJNA674308_P_NODE_14541_length_253_cov_1.240196_g14306_i0 PRJNA674308 14541 253 1.240196 3.13769588 Escherichia coli 562 Bacteria Bacteria 457 4.16e-124   NTclustered gi|1994154591|gb|CP063473.1| 562 g14306 i0 99.209 100 253 2 100 0 1 253 70997 71249 Escherichia coli strain EM18-18-42 chromosome, complete genome blastn 25300 457 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Escherichia Escherichia coli
644510 644510 PRJNA674308_P_NODE_14601_length_252_cov_2.285714_g14366_i0 PRJNA674308 14601 252 2.285714 5.75999928 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 420 5.44e-113   NTclustered gi|290979181|ref|XM_002672267.1| 5762 g14366 i0 96.813 5.77777777777778 251 8 99 0 1 251 360 110 Naegleria gruberi 40S ribosomal protein (NAEGRDRAFT_56310), mRNA blastn 1456 420 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
644511 644511 PRJNA674308_P_NODE_14661_length_252_cov_1.403941_g14426_i0 PRJNA674308 14661 252 1.403941 3.53793132 Mus musculus 10090 Chordata Chordata 418 1.9599999999999994e-112   NTclustered gi|74186522|dbj|AK158971.1| 10090 g14426 i0 99.563 56.7857142857143 229 1 91 0 2 230 930 702 Mus musculus visual cortex cDNA, RIKEN full-length enriched library, clone:K530022D11 product:RAB7, member RAS oncogene family, full insert sequence blastn 14310 418 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
644512 644512 PRJNA674308_P_NODE_14881_length_250_cov_2.069652_g14646_i0 PRJNA674308 14881 250 2.069652 5.17413 Trypanosoma theileri 67003 Euglenozoa other_Eukaryota 368 1.98e-97   NTclustered gi|2026667530|dbj|LC618030.1| 67003 g14646 i0 93.227 151.808 251 15 100 2 1 250 4443 4692 Trypanosoma theileri YMG-11 genes for 18S rRNA, ITS1, 5.8S rRNA, ITS2, 28S rRNA, ITS3, ITS4, ITS5, partial and complete sequence blastn 37952 368 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma theileri
644513 644513 PRJNA674308_P_NODE_14961_length_250_cov_1.034826_g14726_i0 PRJNA674308 14961 250 1.034826 2.587065 Mus musculus 10090 Chordata Chordata 460 3.17e-125   NTclustered gi|46877106|ref|NM_134189.2| 10090 g14726 i0 100 16.008 249 0 99 0 1 249 4384 4632 Mus musculus polypeptide N-acetylgalactosaminyltransferase 10 (Galnt10), mRNA blastn 4002 460 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
644514 644514 PRJNA674308_P_NODE_1501_length_820_cov_2.769131_g1315_i0 PRJNA674308 1501 820 2.769131 22.7068742 Mus musculus 10090 Chordata Chordata 1515 0   NTclustered gi|26344354|dbj|AK075570.1| 10090 g1315 i0 100 24.2085365853659 820 0 100 0 1 820 845 1664 Mus musculus adult male kidney cDNA, RIKEN full-length enriched library, clone:0610007M09 product:superoxide dismutase 3, extracellular, full insert sequence blastn 19851 1515 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
644515 644515 PRJNA674308_P_NODE_15101_length_249_cov_0.965000_g14866_i0 PRJNA674308 15101 249 0.965 2.40285 Mus musculus 10090 Chordata Chordata 460 3.16e-125   NTclustered gi|1276740380|ref|NM_001357993.1| 10090 g14866 i0 100 23.9477911646586 249 0 100 0 1 249 3297 3049 Mus musculus FLYWCH-type zinc finger 1 (Flywch1), transcript variant 1, mRNA blastn 5963 460 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
644516 644516 PRJNA674308_P_NODE_1521_length_815_cov_28.244125_g99_i1 PRJNA674308 1521 815 28.244125 230.18961875 Triparma columacea 722753 SAR_Eukaryotes SAR_Eukaryotes 270 2.62e-82   NR GMI33003.1 722753 g99 i1 63.1 7.45766871165644 203 74 74.4 1 815 210 443 645 GMI33003.1 hypothetical protein TrCOL_g12679 [Triparma columacea] diamond 6078 270 1 Eukaryota Sar     Bolidophyceae Parmales Triparmaceae Triparma Triparma columacea
644517 644517 PRJNA674308_P_NODE_15321_length_247_cov_1.429293_g15086_i0 PRJNA674308 15321 247 1.429293 3.53035371 Mus musculus 10090 Chordata Chordata 451 1.88e-122   NTclustered gi|354793461|gb|JN957962.1| 10090 g15086 i0 99.595 42.4210526315789 247 1 100 0 1 247 32598 32844 Mus musculus targeted KO-first, conditional ready, lacZ-tagged mutant allele Ddx42:tm1a(EUCOMM)Wtsi; transgenic blastn 10478 451 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
644518 644518 PRJNA674308_P_NODE_15421_length_246_cov_1.847716_g15186_i0 PRJNA674308 15421 246 1.847716 4.54538136 Flavobacterium kingsejongi 1678728 Bacteria Bacteria 172 1.63e-38   NTclustered gi|1384925755|gb|CP020919.1| 1678728 g15186 i0 79.752 5.80487804878049 242 45 98 3 4 243 2005836 2006075 Flavobacterium kingsejongi strain WV39 chromosome, complete genome blastn 1428 172 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Flavobacterium Flavobacterium kingsejongi
644519 644519 PRJNA674308_P_NODE_15661_length_245_cov_1.061224_g15426_i0 PRJNA674308 15661 245 1.061224 2.5999988 Lacibacter sediminis 2760713 Bacteria Bacteria 209 1.24e-49   NTclustered gi|1888315716|gb|CP060007.1| 2760713 g15426 i0 84.186 39.7632653061224 215 34 88 0 1 215 3084208 3083994 Lacibacter sediminis strain S13-6-22 chromosome, complete genome blastn 9742 209 1 Bacteria FCB group Pseudomonadati Bacteroidota Chitinophagia Chitinophagales Chitinophagaceae Lacibacter Lacibacter sediminis
644520 644520 PRJNA674308_P_NODE_15681_length_245_cov_0.938776_g15446_i0 PRJNA674308 15681 245 0.938776 2.3000012 Allium sativum 4682 Plants Plants 156 1.64e-33   NTclustered gi|16108|emb|Z12622.1| 4682 g15446 i0 83.799 0.730612244897959 179 13 71 11 8 182 1801 1635 A.sativum mRNA encoding precursor alliinase blastn 179 156 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Asparagales Amaryllidaceae Allium Allium sativum
644521 644521 PRJNA674308_P_NODE_15701_length_244_cov_2.666667_g15466_i0 PRJNA674308 15701 244 2.666667 6.50666748 Mus musculus 10090 Chordata Chordata 451 1.86e-122   NTclustered gi|1371544641|ref|NM_007507.3| 10090 g15466 i0 100 66.1434426229508 244 0 100 0 1 244 13 256 Mus musculus ATP synthase membrane subunit e (Atp5me), transcript variant 1, mRNA; nuclear gene for mitochondrial product blastn 16139 451 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
644522 644522 PRJNA674308_P_NODE_15881_length_243_cov_1.541237_g15646_i0 PRJNA674308 15881 243 1.541237 3.74520591 Mus musculus 10090 Chordata Chordata 449 6.65e-122   NTclustered gi|1720403299|ref|XM_011240032.3| 10090 g15646 i0 100 100.275720164609 243 0 100 0 1 243 5433 5191 PREDICTED: Mus musculus myocyte enhancer factor 2D (Mef2d), transcript variant X5, mRNA blastn 24367 449 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
644523 644523 PRJNA674308_P_NODE_15901_length_243_cov_1.340206_g15666_i0 PRJNA674308 15901 243 1.340206 3.25670058 Mus musculus 10090 Chordata Chordata 444 3.09e-120   NTclustered gi|68342234|gb|AC154403.2| 10090 g15666 i0 99.588 18.0987654320988 243 1 100 0 1 243 24386 24628 Mus musculus BAC clone RP24-239F20 from chromosome 16, complete sequence blastn 4398 444 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
644524 644524 PRJNA674308_P_NODE_16061_length_242_cov_1.077720_g15826_i0 PRJNA674308 16061 242 1.07772 2.6080824 Mus musculus 10090 Chordata Chordata 448 2.3799999999999995e-121   NTclustered gi|354793960|gb|JN958461.1| 10090 g15826 i0 100 44.7768595041322 242 0 100 0 1 242 7177 6936 Mus musculus targeted non-conditional, lacZ-tagged mutant allele AI428936:tm1e(KOMP)Wtsi; transgenic blastn 10836 448 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
644525 644525 PRJNA674308_P_NODE_16141_length_241_cov_1.875000_g15906_i0 PRJNA674308 16141 241 1.875 4.51875 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 411 3.109999999999999e-110   NTclustered gi|290997645|ref|XM_002681346.1| 5762 g15906 i0 97.89 3.96680497925311 237 5 98 0 2 238 354 590 Naegleria gruberi 40s ribosomal protein S3a (NAEGRDRAFT_57012), mRNA blastn 956 411 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
644526 644526 PRJNA674308_P_NODE_16201_length_241_cov_1.333333_g15966_i0 PRJNA674308 16201 241 1.333333 3.21333253 Escherichia coli 562 Bacteria Bacteria 446 8.519999999999999e-121   NTclustered gi|2616880058|dbj|AP027543.1| 562 g15966 i0 100 100 241 0 100 0 1 241 3480877 3481117 Escherichia coli LR-48 DNA, complete genome blastn 24100 446 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Escherichia Escherichia coli
644527 644527 PRJNA674308_P_NODE_16901_length_236_cov_2.224599_g16666_i0 PRJNA674308 16901 236 2.224599 5.25005364 Ochromonadaceae sp. CCMP2298 483371 SAR_Eukaryotes SAR_Eukaryotes 140 1.44e-36   NR KAJ1415980.1 483371 g16666 i0 87 0.978813559322034 77 10 97.9 0 2 232 532 608 KAJ1415980.1 P-loop containing nucleoside triphosphate hydrolase protein [Ochromonadaceae sp. CCMP2298] diamond 231 140 1 Eukaryota Sar     Synurophyceae Ochromonadales Ochromonadaceae   Ochromonadaceae sp. CCMP2298
644528 644528 PRJNA674308_P_NODE_16981_length_236_cov_1.149733_g16746_i0 PRJNA674308 16981 236 1.149733 2.71336988 Mus musculus 10090 Chordata Chordata 436 4.999999999999999e-118   NTclustered gi|2560506366|ref|NR_187114.1| 10090 g16746 i0 100 72.75 236 0 100 0 1 236 452 217 Mus musculus NADH:ubiquinone oxidoreductase core subunit S6 (Ndufs6), transcript variant 12, non-coding RNA blastn 17169 436 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
644529 644529 PRJNA674308_P_NODE_17201_length_234_cov_2.529730_g16966_i0 PRJNA674308 17201 234 2.52973 5.9195682 Mus musculus 10090 Chordata Chordata 433 6.41e-117   NTclustered gi|31419765|gb|BC053333.1| 10090 g16966 i0 100 92.8034188034188 234 0 100 0 1 234 2383 2616 Mus musculus centromere protein B, mRNA (cDNA clone MGC:58961 IMAGE:6399142), complete cds blastn 21716 433 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
644530 644530 PRJNA674308_P_NODE_1721_length_768_cov_4.503477_g1520_i0 PRJNA674308 1721 768 4.503477 34.58670336 Flavobacterium psychrotrophum 2294119 Bacteria Bacteria 713 0   NTclustered gi|1450364207|gb|CP031557.1| 2294119 g1520 i0 85.431 83.5794270833333 707 80 91 15 2 702 581458 582147 Flavobacterium psychrotrophum strain CJ74 chromosome, complete genome blastn 64189 713 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Flavobacterium Flavobacterium psychrotrophum
644531 644531 PRJNA674308_P_NODE_17341_length_234_cov_1.064865_g17106_i0 PRJNA674308 17341 234 1.064865 2.4917841 Mus musculus 10090 Chordata Chordata 427 2.9799999999999993e-115   NTclustered gi|354791759|gb|JN956260.1| 10090 g17106 i0 99.573 69.3974358974359 234 1 100 0 1 234 38024 38257 Mus musculus targeted non-conditional, lacZ-tagged mutant allele Pou2f2:tm1e(EUCOMM)Hmgu; transgenic blastn 16239 427 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
644532 644532 PRJNA674308_P_NODE_17601_length_232_cov_1.420765_g17366_i0 PRJNA674308 17601 232 1.420765 3.2961748 Impatiens glandulifera 253017 Plants Plants 67.6 7.41e-7   NTclustered gi|2217251421|ref|XM_047453244.1| 253017 g17366 i0 95.238 3.55603448275862 42 2 18 0 152 193 1010 1051 PREDICTED: Impatiens glandulifera nitrate regulatory gene2 protein-like (LOC124912598), mRNA blastn 825 67.6 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Ericales Balsaminaceae Impatiens Impatiens glandulifera
644533 644533 PRJNA674308_P_NODE_1781_length_755_cov_2.135977_g1579_i0 PRJNA674308 1781 755 2.135977 16.12662635 Bacillariophyta 2836 SAR_Eukaryotes SAR_Eukaryotes 234 9.27e-72   NR KAI2514036.1 210448 g1579 i0 71.3 3.93774834437086 244 69 96.6 1 753 25 122 365 KAI2514036.1 Calreticulin family [Fragilaria crotonensis] diamond 2973 234 1 Eukaryota Sar   Bacillariophyta Fragilariophyceae Fragilariales Fragilariaceae Fragilaria Fragilaria crotonensis
644534 644534 PRJNA674308_P_NODE_17821_length_231_cov_1.142857_g17586_i0 PRJNA674308 17821 231 1.142857 2.63999967 Mus musculus 10090 Chordata Chordata 422 1.37e-113   NTclustered gi|1371975848|ref|NM_001361592.1| 10090 g17586 i0 99.567 44.2640692640693 231 1 100 0 1 231 3370 3600 Mus musculus upregulator of cell proliferation (Urgcp), transcript variant 7, mRNA blastn 10225 422 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
644535 644535 PRJNA674308_P_NODE_17961_length_230_cov_1.480663_g17726_i0 PRJNA674308 17961 230 1.480663 3.4055249 Mus musculus 10090 Chordata Chordata 425 1.05e-114   NTclustered gi|26324363|dbj|AK028410.1| 10090 g17726 i0 100 75.2 230 0 100 0 1 230 1700 1929 Mus musculus 13 days embryo whole body cDNA, RIKEN full-length enriched library, clone:3930402M11 product:nuclear transport factor, full insert sequence blastn 17296 425 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
644536 644536 PRJNA674308_P_NODE_17981_length_230_cov_1.348066_g17746_i0 PRJNA674308 17981 230 1.348066 3.1005518 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 385 1.78e-102   NTclustered gi|290973374|ref|XM_002669378.1| 5762 g17746 i0 96.943 3.98260869565217 229 7 99 0 2 230 1437 1209 Naegleria gruberi citrate synthase family member (NAEGRDRAFT_54230), partial mRNA blastn 916 385 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
644537 644537 PRJNA674308_P_NODE_18101_length_229_cov_1.977778_g17866_i0 PRJNA674308 18101 229 1.977778 4.52911162 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 357 3.87e-94   NTclustered gi|290994830|ref|XM_002679989.1| 5762 g17866 i0 95.556 0.982532751091703 225 6 97 2 7 227 1880 2104 Naegleria gruberi ATP-dependent RNA helicase (NAEGRDRAFT_78847), mRNA blastn 225 357 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
644538 644538 PRJNA674308_P_NODE_181_length_1989_cov_12.924742_g131_i1 PRJNA674308 181 1989 12.924742 257.07311838 Nitrosomonas sp. 42353 Bacteria Bacteria 454 2.12e-141   NR HNJ38565.1 42353 g131 i1 46.4 2.3393665158371 517 252 74.4 2 503 1981 714 1229 HNJ38565.1 reverse transcriptase domain-containing protein [Nitrosomonas sp.] diamond 4653 454 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Nitrosomonadales Nitrosomonadaceae Nitrosomonas Nitrosomonas sp.
644539 644539 PRJNA674308_P_NODE_1821_length_745_cov_5.867816_g1616_i0 PRJNA674308 1821 745 5.867816 43.7152292 Solitalea lacus 2911172 Bacteria Bacteria 219 6.96e-52   NTclustered gi|2189814522|gb|CP091740.1| 2911172 g1616 i0 85.047 7.65637583892617 214 32 29 0 62 275 1975888 1976101 Solitalea lacus strain S2-8 chromosome blastn 5704 219 1 Bacteria FCB group Pseudomonadati Bacteroidota Sphingobacteriia Sphingobacteriales Sphingobacteriaceae Solitalea Solitalea lacus
644540 644540 PRJNA674308_P_NODE_18241_length_229_cov_0.866667_g18006_i0 PRJNA674308 18241 229 0.866667 1.98466743 Mus musculus 10090 Chordata Chordata 424 3.76e-114   NTclustered gi|18873512|emb|AL626768.21| 10090 g18006 i0 100 22.2227074235808 229 0 100 0 1 229 110420 110192 Mouse DNA sequence from clone RP23-347B4 on chromosome 4, complete sequence blastn 5089 424 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
644541 644541 PRJNA674308_P_NODE_1841_length_739_cov_2.243478_g1634_i0 PRJNA674308 1841 739 2.243478 16.57930242 Ochromonadaceae sp. CCMP2298 483371 SAR_Eukaryotes SAR_Eukaryotes 307 5.929999999999999e-96   NR KAJ1431030.1 483371 g1634 i0 69.5 6.14208389715832 220 59 88.9 3 83 739 11 223 KAJ1431030.1 aconitase family-domain-containing protein [Ochromonadaceae sp. CCMP2298] diamond 4539 307 1 Eukaryota Sar     Synurophyceae Ochromonadales Ochromonadaceae   Ochromonadaceae sp. CCMP2298
644542 644542 PRJNA674308_P_NODE_18601_length_227_cov_1.039326_g18366_i0 PRJNA674308 18601 227 1.039326 2.35927002 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 250 6.68e-62   NTclustered gi|290991150|ref|XM_002678153.1| 5762 g18366 i0 86.9 1.00881057268722 229 22 99 6 1 225 239 15 Naegleria gruberi beta-lactamase (NAEGRDRAFT_79453), partial mRNA blastn 229 250 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
644543 644543 PRJNA674308_P_NODE_18841_length_225_cov_2.340909_g18606_i0 PRJNA674308 18841 225 2.340909 5.26704525 Saprolegnia diclina 112098 SAR_Eukaryotes SAR_Eukaryotes 193 1.13e-44   NTclustered gi|669138647|ref|XM_008606670.1| 1156394 g18606 i0 82.222 1.97777777777778 225 38 99 2 2 225 2084 1861 Saprolegnia diclina VS20 hypothetical protein mRNA blastn 445 193 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Saprolegniaceae Saprolegnia Saprolegnia diclina
644544 644544 PRJNA674308_P_NODE_18861_length_225_cov_1.982955_g18626_i0 PRJNA674308 18861 225 1.982955 4.46164875 Mus musculus 10090 Chordata Chordata 416 6.159999999999998e-112   NTclustered gi|354788524|gb|JN953025.1| 10090 g18626 i0 100 12.7155555555556 225 0 100 0 1 225 25237 25013 Mus musculus targeted non-conditional, lacZ-tagged mutant allele Zfp36l2:tm1e(EUCOMM)Wtsi; transgenic blastn 2861 416 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
644545 644545 PRJNA674308_P_NODE_18881_length_225_cov_1.772727_g18646_i0 PRJNA674308 18881 225 1.772727 3.98863575 Mus musculus 10090 Chordata Chordata 416 6.159999999999998e-112   NTclustered gi|32398587|emb|AL805972.11| 10090 g18646 i0 100 37.0311111111111 225 0 100 0 1 225 172910 173134 Mouse DNA sequence from clone RP23-211P15 on chromosome 4, complete sequence blastn 8332 416 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
644546 644546 PRJNA674308_P_NODE_19001_length_225_cov_0.886364_g18766_i0 PRJNA674308 19001 225 0.886364 1.994319 Mus musculus 10090 Chordata Chordata 416 6.159999999999998e-112   NTclustered gi|2313939812|ref|NM_001310469.2| 10090 g18766 i0 100 14.9733333333333 225 0 100 0 1 225 4588 4364 Mus musculus oncostatin M receptor (Osmr), transcript variant 2, mRNA blastn 3369 416 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
644547 644547 PRJNA674308_P_NODE_1901_length_724_cov_8.674074_g1692_i0 PRJNA674308 1901 724 8.674074 62.80029576 Arsenicibacter rosenii 1750698 Bacteria Bacteria 883 0   NTclustered gi|1445135948|ref|NR_157987.1| 1750698 g1692 i0 97.847 79.9585635359116 511 11 71 0 1 511 511 1 Arsenicibacter rosenii strain SM-1 16S ribosomal RNA, partial sequence blastn 57890 883 1 Bacteria FCB group Pseudomonadati Bacteroidota Cytophagia Cytophagales Spirosomataceae Arsenicibacter Arsenicibacter rosenii
644548 644548 PRJNA674308_P_NODE_19081_length_224_cov_1.782857_g18846_i0 PRJNA674308 19081 224 1.782857 3.99359968 Paracercomonas marina 372086 SAR_Eukaryotes SAR_Eukaryotes 409 1.03e-109   NTclustered gi|88792583|gb|DQ386164.1| 372086 g18846 i0 99.554 86.9464285714286 224 1 100 0 1 224 1917 1694 Paracercomonas marina 28S ribosomal RNA gene, partial sequence blastn 19476 409 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Paracercomonas Paracercomonas marina
644549 644549 PRJNA674308_P_NODE_19241_length_223_cov_2.856322_g19006_i0 PRJNA674308 19241 223 2.856322 6.36959806 Mus musculus 10090 Chordata Chordata 412 7.88e-111   NTclustered gi|354781104|gb|JN945605.1| 10090 g19006 i0 100 30.6860986547085 223 0 100 0 1 223 36141 35919 Mus musculus targeted KO-first, conditional ready, lacZ-tagged mutant allele Pmm2:tm1a(EUCOMM)Hmgu; transgenic blastn 6843 412 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
644550 644550 PRJNA674308_P_NODE_19261_length_223_cov_2.091954_g19026_i0 PRJNA674308 19261 223 2.091954 4.66505742 Mus musculus 10090 Chordata Chordata 412 7.88e-111   NTclustered gi|21594798|gb|BC031983.1| 10090 g19026 i0 100 33.6547085201794 223 0 100 0 1 223 2913 2691 Mus musculus cDNA clone IMAGE:5009788, **** WARNING: chimeric clone **** blastn 7505 412 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
644551 644551 PRJNA674308_P_NODE_19281_length_223_cov_1.752874_g19046_i0 PRJNA674308 19281 223 1.752874 3.90890902 Bacteroidota 976 Bacteria Bacteria 136 2.23e-35   NR WP_166550180.1 976 g19046 i0 100 0.995515695067265 74 0 99.6 0 222 1 119 192 WP_166550180.1 MULTISPECIES: polyribonucleotide nucleotidyltransferase [Bacteroidota] diamond 222 136 1 Bacteria FCB group Pseudomonadati Bacteroidota          
644552 644552 PRJNA674308_P_NODE_19421_length_222_cov_3.826590_g19186_i0 PRJNA674308 19421 222 3.82659 8.4950298 Actinomyces israelii 1659 Bacteria Bacteria 372 1.33e-98   NTclustered gi|2516688811|gb|CP124548.1| 1659 g19186 i0 96.847 260.563063063063 222 7 100 0 1 222 684684 684463 Actinomyces israelii strain F0345 chromosome, complete genome blastn 57845 372 1 Bacteria   Bacillati Actinomycetota Actinomycetes Actinomycetales Actinomycetaceae Actinomyces Actinomyces israelii
644553 644553 PRJNA674308_P_NODE_19581_length_222_cov_1.196532_g19346_i0 PRJNA674308 19581 222 1.196532 2.65630104 Mus musculus 10090 Chordata Chordata 411 2.8199999999999996e-110   NTclustered gi|354794900|gb|JN959401.1| 10090 g19346 i0 100 6 222 0 100 0 1 222 37569 37348 Mus musculus targeted KO-first, conditional ready, lacZ-tagged mutant allele Actr10:tm1a(EUCOMM)Wtsi; transgenic blastn 1332 411 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
644554 644554 PRJNA674308_P_NODE_19921_length_220_cov_1.438596_g19686_i0 PRJNA674308 19921 220 1.438596 3.1649112 Mus musculus 10090 Chordata Chordata 405 1.2999999999999997e-108   NTclustered gi|74213431|dbj|AK159979.1| 10090 g19686 i0 100 95.1545454545455 219 0 99 0 2 220 2400 2182 Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420041M24 product:Metastasis associated protein MTA2 (Metastasis-associated 1-like 1), full insert sequence blastn 20934 405 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
644555 644555 PRJNA674308_P_NODE_2001_length_704_cov_1.609160_g1792_i0 PRJNA674308 2001 704 1.60916 11.3284864 Mus musculus 10090 Chordata Chordata 1301 0   NTclustered gi|74219471|dbj|AK150379.1| 10090 g1792 i0 100 92.3039772727273 704 0 100 0 1 704 21 724 Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830006A19 product:Warning: possibly chimeric clone, full insert sequence blastn 64982 1301 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
644556 644556 PRJNA674308_P_NODE_20041_length_220_cov_0.847953_g19806_i0 PRJNA674308 20041 220 0.847953 1.8654966 Ralstonia insidiosa 190721 Bacteria Bacteria 385 1.69e-102   NTclustered gi|1033679377|gb|CP012605.1| 190721 g19806 i0 98.182 96.6909090909091 220 4 100 0 1 220 2505197 2505416 Ralstonia insidiosa strain FC1138 chromosome 1, complete sequence blastn 21272 385 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Burkholderiaceae Ralstonia Ralstonia insidiosa
644557 644557 PRJNA674308_P_NODE_20141_length_219_cov_1.523529_g19906_i0 PRJNA674308 20141 219 1.523529 3.33652851 Priestia megaterium 1404 Bacteria Bacteria 405 1.29e-108   NTclustered gi|1844614774|gb|CP045272.1| 1404 g19906 i0 100 97.3470319634703 219 0 100 0 1 219 4281117 4281335 Priestia megaterium strain FDU301 chromosome, complete genome blastn 21319 405 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Bacillaceae Priestia Priestia megaterium
644558 644558 PRJNA674308_P_NODE_2021_length_700_cov_87.281106_g1812_i0 PRJNA674308 2021 700 87.281106 610.967742 Tessaracoccus timonensis 2161816 Bacteria Bacteria 826 0   NTclustered gi|1379009977|emb|LT996886.1| 2161816 g1812 i0 95.402 466.391428571429 522 18 74 6 182 700 1995902 1995384 Tessaracoccus sp. Marseille-P5995 genome assembly, chromosome: contig00001 blastn 326474 826 1 Bacteria   Bacillati Actinomycetota Actinomycetes Propionibacteriales Propionibacteriaceae Tessaracoccus Tessaracoccus timonensis
644559 644559 PRJNA674308_P_NODE_20241_length_219_cov_1.117647_g20006_i0 PRJNA674308 20241 219 1.117647 2.44764693 Ramlibacter tataouinensis 94132 Bacteria Bacteria 311 2.9000000000000004e-80   NTclustered gi|2429923713|gb|CP116009.1| 94132 g20006 i0 92.237 97.3013698630137 219 17 100 0 1 219 2563535 2563753 Ramlibacter tataouinensis strain DMF-7 chromosome, complete genome blastn 21309 311 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Comamonadaceae Ramlibacter Ramlibacter tataouinensis
644560 644560 PRJNA674308_P_NODE_20301_length_218_cov_2.461538_g20066_i0 PRJNA674308 20301 218 2.461538 5.36615284 Mus musculus 10090 Chordata Chordata 403 4.62e-108   NTclustered gi|14318680|gb|BC009140.1| 10090 g20066 i0 100 63.5596330275229 218 0 100 0 1 218 1385 1602 Mus musculus major facilitator superfamily domain containing 5, mRNA (cDNA clone MGC:11875 IMAGE:3598007), complete cds blastn 13856 403 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
644561 644561 PRJNA674308_P_NODE_20441_length_218_cov_1.207101_g20206_i0 PRJNA674308 20441 218 1.207101 2.63148018 uncultured bacterium ARCTIC47_D_06 542439 Bacteria Bacteria 337 4.7499999999999994e-88   NTclustered gi|193084460|gb|EU795246.1| 542439 g20206 i0 94.907 40.2247706422018 216 9 99 2 1 215 13363 13149 Uncultured bacterium ARCTIC47_D_06 genomic sequence blastn 8769 337 1 Bacteria               uncultured bacterium ARCTIC47_D_06
644562 644562 PRJNA674308_P_NODE_20521_length_217_cov_2.714286_g20286_i0 PRJNA674308 20521 217 2.714286 5.89000062 Prymnesium parvum 97485 Haptophyta other_Eukaryota 135 8.149999999999998e-35   NR KAL1526108.1 97485 g20286 i0 91.5 4.90783410138249 71 6 98.2 0 3 215 360 430 KAL1526108.1 hypothetical protein AB1Y20_014837 [Prymnesium parvum] diamond 1065 135 1 Eukaryota Haptista   Haptophyta   Prymnesiales Prymnesiaceae Prymnesium Prymnesium parvum
644563 644563 PRJNA674308_P_NODE_20841_length_216_cov_1.413174_g20606_i0 PRJNA674308 20841 216 1.413174 3.05245584 Pedobacter sp. SL55 2995161 Bacteria Bacteria 399 5.909999999999999e-107   NTclustered gi|2381133349|gb|CP113059.1| 2995161 g20606 i0 100 381.375 216 0 100 0 1 216 493 278 Pedobacter sp. SL55 chromosome blastn 82377 399 1 Bacteria FCB group Pseudomonadati Bacteroidota Sphingobacteriia Sphingobacteriales Sphingobacteriaceae Pedobacter Pedobacter sp. SL55
644564 644564 PRJNA674308_P_NODE_21001_length_215_cov_2.506024_g20766_i0 PRJNA674308 21001 215 2.506024 5.3879516 Acetabularia acetabulum 35845 Plants Plants 126 8.22e-36   NR AAM00015.1 35845 g20766 i0 91.5 1.98139534883721 71 6 99.1 0 2 214 44 114 AAM00015.1 centrin, partial [Acetabularia acetabulum] diamond 426 126 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Dasycladales Polyphysaceae Acetabularia Acetabularia acetabulum
644565 644565 PRJNA674308_P_NODE_21101_length_215_cov_1.253012_g20866_i0 PRJNA674308 21101 215 1.253012 2.6939758 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 265 2.24e-66   NTclustered gi|291000647|ref|XM_002682845.1| 5762 g20866 i0 88.889 1.0046511627907 216 22 100 2 1 215 2419 2205 Naegleria gruberi heat shock protein 90 (NAEGRDRAFT_77922), partial mRNA blastn 216 265 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
644566 644566 PRJNA674308_P_NODE_21141_length_215_cov_1.246988_g20906_i0 PRJNA674308 21141 215 1.246988 2.6810242 Mus musculus 10090 Chordata Chordata 398 2.1099999999999997e-106   NTclustered gi|354783174|gb|JN947675.1| 10090 g20906 i0 100 67.5860465116279 215 0 100 0 1 215 23958 24172 Mus musculus targeted non-conditional, lacZ-tagged mutant allele Mrpl16:tm1e(EUCOMM)Wtsi; transgenic blastn 14531 398 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
644567 644567 PRJNA674308_P_NODE_2141_length_677_cov_2.711783_g1929_i0 PRJNA674308 2141 677 2.711783 18.35877091 Mus musculus 10090 Chordata Chordata 1251 0   NTclustered gi|1720407490|ref|XM_006538575.2| 10090 g1929 i0 100 78.1994091580502 677 0 100 0 1 677 13076 13752 PREDICTED: Mus musculus perlecan (heparan sulfate proteoglycan 2) (Hspg2), transcript variant X2, mRNA blastn 52941 1251 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
644568 644568 PRJNA674308_P_NODE_21481_length_213_cov_1.902439_g21246_i0 PRJNA674308 21481 213 1.902439 4.05219507 Mus musculus 10090 Chordata Chordata 394 2.7e-105   NTclustered gi|26104818|dbj|AK088463.1| 10090 g21246 i0 100 48.7417840375587 213 0 100 0 1 213 503 715 Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430018E17 product:NADH DEHYDROGENASE (UBIQUINONE) 1 ALPHA SUBCOMPLEX, 8 (19KD, PGIV) homolog [Homo sapiens], full insert sequence blastn 10382 394 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
644569 644569 PRJNA674308_P_NODE_21561_length_213_cov_1.274390_g21326_i0 PRJNA674308 21561 213 1.27439 2.7144507 Mus musculus 10090 Chordata Chordata 394 2.7e-105   NTclustered gi|74195027|dbj|AK147980.1| 10090 g21326 i0 100 100.103286384977 213 0 100 0 1 213 822 610 Mus musculus melanocyte cDNA, RIKEN full-length enriched library, clone:G270125E12 product:eukaryotic translation elongation factor 1 gamma, full insert sequence blastn 21322 394 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
644570 644570 PRJNA674308_P_NODE_21621_length_213_cov_1.268293_g21386_i0 PRJNA674308 21621 213 1.268293 2.70146409 Micrococcus sp. HOU01 3101753 Bacteria Bacteria 394 2.7e-105   NTclustered gi|2647504773|gb|CP141211.1| 3101753 g21386 i0 100 26.9859154929577 213 0 100 0 1 213 181900 182112 Micrococcus sp. HOU01 chromosome, complete genome blastn 5748 394 1 Bacteria   Bacillati Actinomycetota Actinomycetes Micrococcales Micrococcaceae Micrococcus Micrococcus sp. HOU01

Next page

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;