RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where bioproject = "PRJNA674308" and tax_phylum = "Candidatus Bathyarchaeota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Bathyarchaeota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA674308 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28092466 28092466 PRJNA674308_P_NODE_39225_length_168_cov_0.873950_g38990_i0 PRJNA674308 39225 168 0.87395 1.468236 Candidatus Bathyarchaeia archaeon 3045160 Archaea Archaea 99.4 1.6000000000000002e-22   NR HJX22932.1 3045160 g38990 i0 83.9 17 56 9 100 0 168 1 797 852 HJX22932.1 RNase H-like domain-containing protein [Candidatus Bathyarchaeia archaeon] diamond 2856 99.4 1 Archaea   Thermoproteati Candidatus Bathyarchaeota Candidatus Bathyarchaeia       Candidatus Bathyarchaeia archaeon
30081639 30081639 PRJNA674308_P_NODE_31772_length_179_cov_2.800000_g31537_i0 PRJNA674308 31772 179 2.8 5.012 Candidatus Bathyarchaeota archaeon 2026714 Archaea Archaea 62.8 1.22e-9   NR MEJ2272760.1 2026714 g31537 i0 50 0.972067039106145 58 29 97.2 0 2 175 255 312 MEJ2272760.1 GntG family PLP-dependent aldolase [Candidatus Bathyarchaeota archaeon] diamond 174 62.8 1 Archaea   Thermoproteati Candidatus Bathyarchaeota         Candidatus Bathyarchaeota archaeon

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;