RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA473824" and tax_clade = "Duplodnaviria"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Duplodnaviria · 1 ✖

bioproject 1

  • PRJNA473824 · 1 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30992566 30992566 PRJNA473824_P_NODE_144774_length_151_cov_4.421053_g144136_i0 PRJNA473824 144774 151 4.421053 6.67579003 Pseudomonas phage phi-2 1450169 Viruses Viruses 45.4 0.00114   NR YP_003345487.1 693582 g144136 i0 83.3 0.47682119205298 24 4 47.7 0 74 3 168 191 YP_003345487.1 DNA polymerase exonuclease subunit [Pseudomonas phage phi-2] diamond 72 45.4 1 Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes   Autographiviridae Tunggulvirus Tunggulvirus f2

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;