RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

21 rows where tax_clade = "Duplodnaviria"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_phylum 2

analysis 2

tax_superkingdom 1

tax_kingdom 1

tax_clade 1

  • Duplodnaviria · 21 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
405293 405293 PRJNA383995_P_NODE_5821_length_262_cov_0.957746_g5722_i0 PRJNA383995 5821 262 0.957746 2.50929452 Tequintavirus SP3 2733991 Viruses Viruses 479 9.249999999999999e-131   NTclustered gi|1842017380|ref|NC_048001.1| 2053625 g5722 i0 99.618 92.4083969465649 262 1 100 0 1 262 90628 90889 Salmonella phage SP3, partial genome blastn 24211 479 1 Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes   Demerecviridae Tequintavirus Tequintavirus SP3
1467068 1467068 PRJNA1078753_P_NODE_17442_length_289_cov_1.703704_g17246_i0 PRJNA1078753 17442 289 1.703704 4.92370456 Staphylococcus phage Lacachita 2970965 Viruses Viruses 429 1.06e-115   NTclustered gi|2287971722|gb|OP142323.1| 2973490 g17246 i0 93.426 8.98961937716263 289 19 100 0 1 289 44630 44918 Staphylococcus phage Lacachita, complete genome blastn 2598 429 1 Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes       Staphylococcus phage Lacachita
1680127 1680127 PRJNA383995_P_NODE_8302_length_224_cov_1.165714_g8203_i0 PRJNA383995 8302 224 1.165714 2.61119936 Tequintavirus SP3 2733991 Viruses Viruses 409 1.03e-109   NTclustered gi|1842017380|ref|NC_048001.1| 2053625 g8203 i0 100 99.1964285714286 221 0 99 0 4 224 19950 19730 Salmonella phage SP3, partial genome blastn 22220 409 1 Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes   Demerecviridae Tequintavirus Tequintavirus SP3
2351201 2351201 PRJNA383995_P_NODE_5242_length_275_cov_0.783186_g5143_i0 PRJNA383995 5242 275 0.783186 2.1537615 Tequintavirus 187218 Viruses Viruses 470 5.89e-128   NTclustered gi|1842017380|ref|NC_048001.1| 2053625 g5143 i0 97.455 101.021818181818 275 7 100 0 1 275 18526 18252 Salmonella phage SP3, partial genome blastn 27781 470 1 Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes   Demerecviridae Tequintavirus Tequintavirus SP3
3629946 3629946 PRJNA396510_P_NODE_4263_length_275_cov_0.783186_g4194_i0 PRJNA396510 4263 275 0.783186 2.1537615 Tequintavirus 187218 Viruses Viruses 470 5.89e-128   NTclustered gi|1842017380|ref|NC_048001.1| 2053625 g4194 i0 97.455 101.021818181818 275 7 100 0 1 275 18526 18252 Salmonella phage SP3, partial genome blastn 27781 470 1 Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes   Demerecviridae Tequintavirus Tequintavirus SP3
8058563 8058563 PRJNA383995_P_NODE_16747_length_165_cov_0.879310_g16648_i0 PRJNA383995 16747 165 0.87931 1.4508615 Tequintavirus SP3 2733991 Viruses Viruses 305 9.59e-79   NTclustered gi|1842017380|ref|NC_048001.1| 2053625 g16648 i0 100 55.1272727272727 165 0 100 0 1 165 3408 3244 Salmonella phage SP3, partial genome blastn 9096 305 1 Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes   Demerecviridae Tequintavirus Tequintavirus SP3
8065252 8065252 PRJNA396510_P_NODE_16707_length_161_cov_0.857143_g16638_i0 PRJNA396510 16707 161 0.857143 1.38000023 Tequintavirus SP3 2733991 Viruses Viruses 270 3.389999999999999e-68   NTclustered gi|1842017380|ref|NC_048001.1| 2053625 g16638 i0 96.894 99.0310559006211 161 5 100 0 1 161 20132 20292 Salmonella phage SP3, partial genome blastn 15944 270 1 Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes   Demerecviridae Tequintavirus Tequintavirus SP3
10007235 10007235 PRJNA396510_P_NODE_3448_length_303_cov_1.196850_g3379_i0 PRJNA396510 3448 303 1.19685 3.6264555 Tequintavirus 187218 Viruses Viruses 555 1.7599999999999995e-153   NTclustered gi|1842017380|ref|NC_048001.1| 2053625 g3379 i0 99.67 99.947194719472 303 1 100 0 1 303 57166 56864 Salmonella phage SP3, partial genome blastn 30284 555 1 Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes   Demerecviridae Tequintavirus Tequintavirus SP3
11890740 11890740 PRJNA396510_P_NODE_3450_length_303_cov_0.909449_g3381_i0 PRJNA396510 3450 303 0.909449 2.75563047 Tequintavirus SP3 2733991 Viruses Viruses 555 1.7599999999999995e-153   NTclustered gi|1842017380|ref|NC_048001.1| 2053625 g3381 i0 99.67 99.986798679868 303 1 100 0 1 303 38517 38819 Salmonella phage SP3, partial genome blastn 30296 555 1 Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes   Demerecviridae Tequintavirus Tequintavirus SP3
16989366 16989366 PRJNA396510_P_NODE_4794_length_262_cov_0.957746_g4725_i0 PRJNA396510 4794 262 0.957746 2.50929452 Tequintavirus SP3 2733991 Viruses Viruses 479 9.249999999999999e-131   NTclustered gi|1842017380|ref|NC_048001.1| 2053625 g4725 i0 99.618 92.4083969465649 262 1 100 0 1 262 90628 90889 Salmonella phage SP3, partial genome blastn 24211 479 1 Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes   Demerecviridae Tequintavirus Tequintavirus SP3
16989371 16989371 PRJNA396510_P_NODE_6874_length_224_cov_1.457143_g6805_i0 PRJNA396510 6874 224 1.457143 3.26400032 Tequintavirus SP3 2733991 Viruses Viruses 409 1.03e-109   NTclustered gi|1842017380|ref|NC_048001.1| 2053625 g6805 i0 100 99.1964285714286 221 0 99 0 4 224 19950 19730 Salmonella phage SP3, partial genome blastn 22220 409 1 Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes   Demerecviridae Tequintavirus Tequintavirus SP3
17656777 17656777 PRJNA396510_P_NODE_9794_length_192_cov_1.356643_g9725_i0 PRJNA396510 9794 192 1.356643 2.60475456 Tequintavirus 187218 Viruses Viruses 355 1.13e-93   NTclustered gi|1842017380|ref|NC_048001.1| 2053625 g9725 i0 100 20.8541666666667 192 0 100 0 1 192 52481 52672 Salmonella phage SP3, partial genome blastn 4004 355 1 Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes   Demerecviridae Tequintavirus Tequintavirus SP3
20312524 20312524 PRJNA704949_P_NODE_1320416_length_218_cov_2.130178_g1305079_i0 PRJNA704949 1320416 218 2.130178 4.64378804 Autographivirales 3420540 Viruses Viruses 298 2.24e-76   NTclustered gi|271277964|emb|FN594518.1| 693582 g1305079 i0 91.284 3 218 19 100 0 1 218 27098 26881 Pseudomonas phage phi-2, complete genome, isolated from Pseudomonas fluorescens SBW25 blastn 654 298 1 Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes   Autographiviridae Tunggulvirus Tunggulvirus f2
21910103 21910103 PRJNA1120060_P_NODE_1125358_length_311_cov_2.714286_g1107423_i0 PRJNA1120060 1125358 311 2.714286 8.44142946 Percavirus felidgamma1 3050285 Viruses Viruses 63.9 1.34e-5   NTclustered gi|944325061|ref|NC_028099.1| 1452540 g1107423 i0 91.304 2.5048231511254 46 4 15 0 172 217 114566 114611 Felis catus gammaherpesvirus 1 isolate 31286, complete genome blastn 779 63.9 1 Viruses Duplodnaviria Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Percavirus Percavirus felidgamma1
22594453 22594453 PRJNA940501_S_NODE_102978_length_236_cov_1.461140_g102160_i0 PRJNA940501 102978 236 1.46114 3.4482904 Tunggulvirus f2 2733363 Viruses Viruses 206 1.5399999999999998e-48   NTclustered gi|271277964|emb|FN594518.1| 693582 g102160 i0 83.475 3 236 23 99 8 3 236 41335 41114 Pseudomonas phage phi-2, complete genome, isolated from Pseudomonas fluorescens SBW25 blastn 708 206 1 Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes   Autographiviridae Tunggulvirus Tunggulvirus f2
26571466 26571466 PRJNA1233465a_S_NODE_81720_length_247_cov_2.626263_g80446_i0 PRJNA1233465 81720 247 2.626263 6.48686961 Viruses 10239 Viruses Viruses 457 4.05e-124   NTclustered gi|2287971722|gb|OP142323.1| 2973490 g80446 i0 100 15.1093117408907 247 0 100 0 1 247 13640 13886 Staphylococcus phage Lacachita, complete genome blastn 3732 457 1 Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes       Staphylococcus phage Lacachita
27924444 27924444 PRJNA1148190_P_NODE_666025_length_247_cov_0.885057_g654852_i0 PRJNA1148190 666025 247 0.885057 2.18609079 Pseudomonas phage phi-2 1450169 Viruses Viruses 85.5 8.65e-19   NR YP_003345491.1 693582 g654852 i0 55.3 0.923076923076923 76 34 92.3 0 11 238 56 131 YP_003345491.1 HNH endonuclease [Pseudomonas phage phi-2] diamond 228 85.5 1 Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes   Autographiviridae Tunggulvirus Tunggulvirus f2
30722865 30722865 PRJNA1145574_P_NODE_2234_length_550_cov_1.471698_g2052_i0 PRJNA1145574 2234 550 1.471698 8.094339 Demerecviridae 2731690 Viruses Viruses 103 3.48e-24   NR YP_009804592.1 2053625 g2052 i0 43 3.94909090909091 142 76 74.7 3 114 524 5 146 YP_009804592.1 HNH endonuclease [Salmonella phage SP3] diamond 2172 103 1 Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes   Demerecviridae Tequintavirus Tequintavirus SP3
30992566 30992566 PRJNA473824_P_NODE_144774_length_151_cov_4.421053_g144136_i0 PRJNA473824 144774 151 4.421053 6.67579003 Pseudomonas phage phi-2 1450169 Viruses Viruses 45.4 0.00114   NR YP_003345487.1 693582 g144136 i0 83.3 0.47682119205298 24 4 47.7 0 74 3 168 191 YP_003345487.1 DNA polymerase exonuclease subunit [Pseudomonas phage phi-2] diamond 72 45.4 1 Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes   Autographiviridae Tunggulvirus Tunggulvirus f2
31405616 31405616 PRJNA556992_P_NODE_1002956_length_230_cov_3.273885_g1000766_i0 PRJNA556992 1002956 230 3.273885 7.5299355 Pseudomonas phage phi-2 1450169 Viruses Viruses 65.9 2.03e-10   NR YP_003345474.1 693582 g1000766 i0 50.6 1.08260869565217 83 27 99.1 4 2 229 268 343 YP_003345474.1 hypothetical protein SBWP25_0009 [Pseudomonas phage phi-2] diamond 249 65.9 1 Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes   Autographiviridae Tunggulvirus Tunggulvirus f2
31659900 31659900 PRJNA596870_P_NODE_9877_length_402_cov_1.142857_g9744_i0 PRJNA596870 9877 402 1.142857 4.59428514 Pseudomonas phage phi-2 1450169 Viruses Viruses 128 6.31e-33   NR YP_003345487.1 693582 g9744 i0 58 0.835820895522388 112 43 80.6 2 77 400 8 119 YP_003345487.1 DNA polymerase exonuclease subunit [Pseudomonas phage phi-2] diamond 336 128 1 Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes   Autographiviridae Tunggulvirus Tunggulvirus f2

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;