RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA459724" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA459724 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26776011 26776011 PRJNA459724_S_NODE_1401_length_184_cov_5.557047_g1398_i0 PRJNA459724 1401 184 5.557047 10.22496648 Eurotatoria 2816136 Rotifera other_Eukaryota 76.3 2.63e-14   NR CAF0870318.1 249248 g1398 i0 72.3 9.19565217391304 47 13 76.6 0 184 44 829 875 CAF0870318.1 unnamed protein product [Adineta ricciae] diamond 1692 76.3 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta ricciae
27424034 27424034 PRJNA459724_S_NODE_1403_length_184_cov_5.154362_g1400_i0 PRJNA459724 1403 184 5.154362 9.48402608 Adineta ricciae 249248 Rotifera other_Eukaryota 55.8 4.08e-7   NR CAF1023991.1 249248 g1400 i0 61.5 4.6304347826087 39 13 63.6 1 181 65 771 807 CAF1023991.1 unnamed protein product [Adineta ricciae] diamond 852 55.8 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta ricciae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;