RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA459724" and tax_phylum = "Chaetognatha"

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tax_superkingdom 1

tax_phylum 1

  • Chaetognatha · 1 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA459724 · 1 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
32495349 32495349 PRJNA459724_S_NODE_1779_length_173_cov_20.456522_g1776_i0 PRJNA459724 1779 173 20.456522 35.38978306 Metazoa 33208 Chaetognatha other_Eukaryota 68.6 1.05e-12   NR CAL69097.1 52888 g1776 i0 86.1 3.12138728323699 36 5 62.4 0 172 65 121 156 CAL69097.1 TPA: putative 40S ribosomal protein S11 isoform 1 [Spadella cephaloptera] diamond 540 68.9 0.995645863570392 Eukaryota Opisthokonta Metazoa Chaetognatha Sagittoidea Phragmophora Spadellidae Spadella Spadella cephaloptera

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;