RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA459724" and tax_clade = "Stenosarchaea group"

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analysis 2

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Stenosarchaea group · 3 ✖

bioproject 1

  • PRJNA459724 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
18294657 18294657 PRJNA459724_P_NODE_1995_length_383_cov_66.864407_g1611_i0 PRJNA459724 1995 383 66.864407 256.09067881 uncultured Methanoregula sp. 1005933 Archaea Archaea 614 3.719999999999999e-171   NTclustered gi|2621785414|emb|OY781872.1| 1005933 g1611 i0 95.573 259.691906005222 384 16 100 1 1 383 3117146 3117529 MAG: uncultured Methanoregula sp. isolate a338d9b7-13de-4e9d-8f1a-cfe667c23436 genome assembly, chromosome: 1 blastn 99462 614 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanoregulaceae Methanoregula uncultured Methanoregula sp.
31593351 31593351 PRJNA459724_P_NODE_2436_length_326_cov_2.111111_g2045_i0 PRJNA459724 2436 326 2.111111 6.88222186 Methanolobus sp. 1874737 Archaea Archaea 55.1 1.99e-7   NR MDY0388864.1 1874737 g2045 i0 50 1.56441717791411 56 28 51.5 0 253 86 17 72 MDY0388864.1 hypothetical protein [Methanolobus sp.] diamond 510 55.1 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanolobus Methanolobus sp.
32447602 32447602 PRJNA459724_P_NODE_3979_length_217_cov_1.750000_g3587_i0 PRJNA459724 3979 217 1.75 3.7975 Methanolobus sp. 1874737 Archaea Archaea 40.8 0.023   NR MDY0388864.1 1874737 g3587 i0 48.8 1.27188940092166 43 22 59.4 0 74 202 17 59 MDY0388864.1 hypothetical protein [Methanolobus sp.] diamond 276 40.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanolobus Methanolobus sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;