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contig_metadata

5 rows where bioproject = "PRJNA1218818" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 5 ✖

bioproject 1

  • PRJNA1218818 · 5 ✖

analysis 1

tax_phylum 0

tax_kingdom 0

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
20735178 20735178 PRJNA1218818_P_NODE_22177_length_264_cov_1.209424_g22110_i0 PRJNA1218818 22177 264 1.209424 3.19287936 archaeon 1906665 Archaea Archaea 119 1.34e-30   NR MDP2435337.1 1906665 g22110 i0 79.7 0.840909090909091 74 15 84.1 0 43 264 42 115 MDP2435337.1 30S ribosomal protein S5 [archaeon] diamond 222 119 1 Archaea               archaeon
28841078 28841078 PRJNA1218818_P_NODE_25208_length_249_cov_0.875000_g25141_i0 PRJNA1218818 25208 249 0.875 2.17875 archaeon 1906665 Archaea Archaea 114 1.91e-28   NR MDP2438594.1 1906665 g25141 i0 62.7 1 83 29 97.6 1 245 3 244 326 MDP2438594.1 WD40 repeat domain-containing protein [archaeon] diamond 249 114 1 Archaea               archaeon
29283067 29283067 PRJNA1218818_P_NODE_28329_length_242_cov_0.911243_g28262_i0 PRJNA1218818 28329 242 0.911243 2.20520806 archaeon 1906665 Archaea Archaea 110 9.84e-28   NR RYH28899.1 1906665 g28262 i0 63 1.00413223140496 81 25 99.2 3 3 242 87 163 RYH28899.1 MAG: PaaI family thioesterase [archaeon] diamond 243 110 1 Archaea               archaeon
29661676 29661676 PRJNA1218818_P_NODE_20110_length_278_cov_2.043902_g20043_i0 PRJNA1218818 20110 278 2.043902 5.68204756 archaeon 1906665 Archaea Archaea 67.4 1.23e-10   NR RYH26476.1 1906665 g20043 i0 33.1 1.27338129496403 118 53 99.3 2 277 2 132 249 RYH26476.1 MAG: hypothetical protein EON65_14495 [archaeon] diamond 354 67.4 1 Archaea               archaeon
30357587 30357587 PRJNA1218818_P_NODE_21032_length_272_cov_1.316583_g20965_i0 PRJNA1218818 21032 272 1.316583 3.58110576 archaeon 1906665 Archaea Archaea 89 6.14e-19   NR NCQ50350.1 1906665 g20965 i0 45.2 0.926470588235294 84 46 92.6 0 17 268 31 114 NCQ50350.1 3'-5' exonuclease [archaeon] diamond 252 89 1 Archaea               archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;