RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

6,389 rows where bioproject = "PRJNA1218818"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 4

analysis 2

bioproject 1

  • PRJNA1218818 · 6,389 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
333566 333566 PRJNA1218818_P_NODE_10001_length_385_cov_1.269231_g9934_i0 PRJNA1218818 10001 385 1.269231 4.88653935 Mus musculus 10090 Chordata Chordata 699 0   NTclustered gi|26084680|dbj|AK035551.1| 10090 g9934 i0 99.481 97.1246753246753 385 1 100 1 1 385 112 495 Mus musculus adult male urinary bladder cDNA, RIKEN full-length enriched library, clone:9530065D22 product:mannosidase 2, alpha B1, full insert sequence blastn 37393 699 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
333567 333567 PRJNA1218818_P_NODE_10101_length_383_cov_1.793548_g10034_i0 PRJNA1218818 10101 383 1.793548 6.86928884 Mus musculus 10090 Chordata Chordata 708 0   NTclustered gi|74198925|dbj|AK151779.1| 10090 g10034 i0 100 37.8485639686684 383 0 100 0 1 383 1680 1298 Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830037F07 product:interferon gamma induced GTPase, full insert sequence blastn 14496 708 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
333568 333568 PRJNA1218818_P_NODE_10241_length_381_cov_1.412338_g10174_i0 PRJNA1218818 10241 381 1.412338 5.38100778 Mus musculus 10090 Chordata Chordata 704 0   NTclustered gi|227116299|ref|NM_008468.4| 10090 g10174 i0 100 62.5144356955381 381 0 100 0 1 381 2760 3140 Mus musculus karyopherin subunit alpha 6 (Kpna6), mRNA blastn 23818 704 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
333569 333569 PRJNA1218818_P_NODE_10301_length_380_cov_1.309446_g10234_i0 PRJNA1218818 10301 380 1.309446 4.9758948 Mus musculus 10090 Chordata Chordata 702 0   NTclustered gi|1720410284|ref|XM_006539258.3| 10090 g10234 i0 100 51.5736842105263 380 0 100 0 1 380 1876 2255 PREDICTED: Mus musculus mitochondrial fission regulator 1-like (Mtfr1l), transcript variant X2, mRNA blastn 19598 702 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
333570 333570 PRJNA1218818_P_NODE_10461_length_377_cov_1.769737_g10394_i0 PRJNA1218818 10461 377 1.769737 6.67190849 Mus musculus 10090 Chordata Chordata 697 0   NTclustered gi|26353067|dbj|AK088131.1| 10090 g10394 i0 100 97.7533156498674 377 0 100 0 1 377 1310 1686 Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430004L05 product:DiGeorge syndrome gene c, full insert sequence blastn 36853 697 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
333571 333571 PRJNA1218818_P_NODE_10561_length_375_cov_1.920530_g10494_i0 PRJNA1218818 10561 375 1.92053 7.2019875 Mus musculus 10090 Chordata Chordata 614 3.629999999999999e-171   NTclustered gi|78190344|gb|AC151846.3| 10090 g10494 i0 95.876 26.5093333333333 388 1 99 1 2 374 218532 218145 Mus musculus BAC clone RP23-13B8 from chromosome 10, complete sequence blastn 9941 614 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
333572 333572 PRJNA1218818_P_NODE_10601_length_375_cov_1.003311_g10534_i0 PRJNA1218818 10601 375 1.003311 3.76241625 Mus musculus 10090 Chordata Chordata 688 0   NTclustered gi|26097929|dbj|AK078546.1| 10090 g10534 i0 99.734 32.5946666666667 376 0 100 1 1 375 2068 1693 Mus musculus 12 days embryo female mullerian duct includes surrounding region cDNA, RIKEN full-length enriched library, clone:6820446M14 product:weakly similar to MOLONEY MURINE LEUKEMIA VIRUS (M-MULV) TRANSPOSON GENES AND REPLICATING DETAILS (FRAGMENT) [Murine leukemia virus], full insert sequence blastn 12223 688 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
333573 333573 PRJNA1218818_P_NODE_10721_length_373_cov_1.043333_g10654_i0 PRJNA1218818 10721 373 1.043333 3.89163209 Mus musculus 10090 Chordata Chordata 689 0   NTclustered gi|1334928408|ref|NR_153404.1| 10090 g10654 i0 100 84.9195710455764 373 0 100 0 1 373 2784 2412 Mus musculus polymerase (DNA directed), gamma (Polg), transcript variant 4, non-coding RNA blastn 31675 689 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
333574 333574 PRJNA1218818_P_NODE_10821_length_371_cov_1.731544_g10754_i0 PRJNA1218818 10821 371 1.731544 6.42402824 Mus musculus 10090 Chordata Chordata 686 0   NTclustered gi|68342246|gb|AC152413.5| 10090 g10754 i0 100 82.2425876010782 371 0 100 0 1 371 45228 44858 Mus musculus BAC clone RP23-431A21 from chromosome 10, complete sequence blastn 30512 686 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
333575 333575 PRJNA1218818_P_NODE_10861_length_370_cov_3.525253_g10794_i0 PRJNA1218818 10861 370 3.525253 13.0434361 Mus musculus 10090 Chordata Chordata 684 0   NTclustered gi|354785421|gb|JN949922.1| 10090 g10794 i0 100 38.1432432432432 370 0 100 0 1 370 29881 30250 Mus musculus targeted KO-first, conditional ready, lacZ-tagged mutant allele Actr1b:tm1a(EUCOMM)Wtsi; transgenic blastn 14113 684 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
333576 333576 PRJNA1218818_P_NODE_10941_length_369_cov_1.793919_g10874_i0 PRJNA1218818 10941 369 1.793919 6.61956111 Mus musculus 10090 Chordata Chordata 682 0   NTclustered gi|1907098990|ref|XR_004938368.1| 10090 g10874 i0 100 87.0569105691057 369 0 100 0 1 369 4762 5130 PREDICTED: Mus musculus bone morphogenetic protein 1 (Bmp1), transcript variant X8, misc_RNA blastn 32124 682 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
333577 333577 PRJNA1218818_P_NODE_10961_length_369_cov_1.347973_g10894_i0 PRJNA1218818 10961 369 1.347973 4.97402037 Mus musculus 10090 Chordata Chordata 676 0   NTclustered gi|74194086|dbj|AK162502.1| 10090 g10894 i0 99.729 26.8157181571816 369 1 100 0 1 369 1380 1012 Mus musculus adult male urinary bladder cDNA, RIKEN full-length enriched library, clone:9530033H04 product:COP9 (constitutive photomorphogenic) homolog, subunit 8 (Arabidopsis thaliana), full insert sequence blastn 9895 676 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
333578 333578 PRJNA1218818_P_NODE_10981_length_368_cov_3.789831_g10914_i0 PRJNA1218818 10981 368 3.789831 13.94657808 Mus musculus 10090 Chordata Chordata 680 0   NTclustered gi|1907142999|ref|XM_017319222.3| 10090 g10914 i0 100 56.8641304347826 368 0 100 0 1 368 489 122 PREDICTED: Mus musculus 1-acylglycerol-3-phosphate O-acyltransferase 2 (Agpat2), transcript variant X1, mRNA blastn 20926 680 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
333579 333579 PRJNA1218818_P_NODE_11001_length_368_cov_1.867797_g10934_i0 PRJNA1218818 11001 368 1.867797 6.87349296 Mus musculus 10090 Chordata Chordata 680 0   NTclustered gi|27848011|emb|AL808126.10| 10090 g10934 i0 100 99.9211956521739 368 0 100 0 1 368 78286 78653 Mouse DNA sequence from clone RP23-37B4 on chromosome 2, complete sequence blastn 36771 680 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
333580 333580 PRJNA1218818_P_NODE_11041_length_368_cov_1.044068_g10974_i0 PRJNA1218818 11041 368 1.044068 3.84217024 Mus musculus 10090 Chordata Chordata 680 0   NTclustered gi|68342266|gb|AC159314.3| 10090 g10974 i0 100 28.25 368 0 100 0 1 368 117389 117022 Mus musculus BAC clone RP23-110E20 from chromosome 9, complete sequence blastn 10396 680 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
333581 333581 PRJNA1218818_P_NODE_11081_length_367_cov_2.129252_g11014_i0 PRJNA1218818 11081 367 2.129252 7.81435484 Mus musculus 10090 Chordata Chordata 673 0   NTclustered gi|121582461|ref|NM_178692.3| 10090 g11014 i0 99.728 8.91553133514986 367 1 100 0 1 367 2543 2177 Mus musculus RIKEN cDNA C130074G19 gene (C130074G19Rik), mRNA blastn 3272 673 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
333582 333582 PRJNA1218818_P_NODE_11121_length_367_cov_1.047619_g11054_i0 PRJNA1218818 11121 367 1.047619 3.84476173 Mus musculus 10090 Chordata Chordata 678 0   NTclustered gi|2463694710|ref|NM_001418667.1| 10090 g11054 i0 100 99.7656675749319 367 0 100 0 1 367 1154 1520 Mus musculus spermatogenesis associated, serine-rich 2 (Spats2), transcript variant 5, mRNA blastn 36614 678 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
333583 333583 PRJNA1218818_P_NODE_11161_length_366_cov_1.829352_g11094_i0 PRJNA1218818 11161 366 1.829352 6.69542832 Mus musculus 10090 Chordata Chordata 671 0   NTclustered gi|219520537|gb|BC145333.1| 10090 g11094 i0 99.727 58.551912568306 366 1 100 0 1 366 876 1241 Mus musculus cDNA clone IMAGE:9053889, containing frame-shift errors blastn 21430 671 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
333584 333584 PRJNA1218818_P_NODE_11181_length_366_cov_1.412969_g11114_i0 PRJNA1218818 11181 366 1.412969 5.17146654 Mus musculus 10090 Chordata Chordata 676 0   NTclustered gi|133777657|gb|BC112905.1| 10090 g11114 i0 100 17.5027322404372 366 0 100 0 1 366 3089 3454 Mus musculus ATPase, H+ transporting, lysosomal V0 subunit A2, mRNA (cDNA clone MGC:118073 IMAGE:3670722), complete cds blastn 6406 676 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
333585 333585 PRJNA1218818_P_NODE_11201_length_366_cov_0.996587_g11134_i0 PRJNA1218818 11201 366 0.996587 3.64750842 Mus musculus 10090 Chordata Chordata 671 0   NTclustered gi|126723460|ref|NM_009840.3| 10090 g11134 i0 99.727 100.065573770492 366 1 100 0 1 366 479 844 Mus musculus chaperonin containing TCP1 subunit 8 (Cct8), mRNA blastn 36624 671 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
333586 333586 PRJNA1218818_P_NODE_11241_length_365_cov_1.547945_g11174_i0 PRJNA1218818 11241 365 1.547945 5.64999925 Mus musculus 10090 Chordata Chordata 669 0   NTclustered gi|356995927|ref|NM_029657.4| 10090 g11174 i0 99.726 89.8082191780822 365 1 100 0 1 365 2263 2627 Mus musculus mahogunin, ring finger 1 (Mgrn1), transcript variant 2, mRNA blastn 32780 669 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
333587 333587 PRJNA1218818_P_NODE_11341_length_363_cov_2.389655_g11274_i0 PRJNA1218818 11341 363 2.389655 8.67444765 Mus musculus 10090 Chordata Chordata 671 0   NTclustered gi|354797680|gb|JN962181.1| 10090 g11274 i0 100 36.2837465564738 363 0 100 0 1 363 27297 26935 Mus musculus targeted KO-first, conditional ready, lacZ-tagged mutant allele Ncln:tm1a(EUCOMM)Hmgu; transgenic blastn 13171 671 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
333588 333588 PRJNA1218818_P_NODE_11481_length_361_cov_4.326389_g11414_i0 PRJNA1218818 11481 361 4.326389 15.61826429 Mus musculus 10090 Chordata Chordata 667 0   NTclustered gi|74213655|dbj|AK160103.1| 10090 g11414 i0 100 94.7728531855956 361 0 100 0 1 361 2438 2078 Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420049E19 product:pre-B-cell leukemia transcription factor interacting protein 1, full insert sequence blastn 34213 667 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
333589 333589 PRJNA1218818_P_NODE_11641_length_359_cov_1.615385_g11574_i0 PRJNA1218818 11641 359 1.615385 5.79923215 Mus musculus 10090 Chordata Chordata 664 0   NTclustered gi|239937550|ref|NM_001161765.1| 10090 g11574 i0 100 38.6796657381616 359 0 100 0 1 359 379 21 Mus musculus flavin containing monooxygenase 5 (Fmo5), transcript variant 1, mRNA blastn 13886 664 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
333590 333590 PRJNA1218818_P_NODE_11821_length_356_cov_2.964664_g11754_i0 PRJNA1218818 11821 356 2.964664 10.55420384 Mus musculus 10090 Chordata Chordata 658 0   NTclustered gi|26346205|dbj|AK077329.1| 10090 g11754 i0 100 97.4297752808989 356 0 100 0 1 356 964 609 Mus musculus adult male pituitary gland cDNA, RIKEN full-length enriched library, clone:5330422J23 product:PUTATIVE TRANSMEMBRANE PROTEIN homolog [Homo sapiens], full insert sequence blastn 34685 658 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
333591 333591 PRJNA1218818_P_NODE_11841_length_356_cov_1.713781_g11774_i0 PRJNA1218818 11841 356 1.713781 6.10106036 Mus musculus 10090 Chordata Chordata 658 0   NTclustered gi|158937257|ref|NM_029887.3| 10090 g11774 i0 100 99.4213483146067 356 0 100 0 1 356 667 312 Mus musculus Yip1 interacting factor homolog B (S. cerevisiae) (Yif1b), transcript variant 1, mRNA blastn 35394 658 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
333592 333592 PRJNA1218818_P_NODE_11901_length_355_cov_2.634752_g11834_i0 PRJNA1218818 11901 355 2.634752 9.3533696 Mus musculus 10090 Chordata Chordata 656 0   NTclustered gi|5103294|dbj|AB028895.1| 10090 g11834 i0 100 35.5971830985916 355 0 100 0 1 355 1437 1083 Mus musculus mRNA for cell-surface sialomucin MGC-24, complete cds blastn 12637 656 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
333593 333593 PRJNA1218818_P_NODE_11921_length_355_cov_1.638298_g11854_i0 PRJNA1218818 11921 355 1.638298 5.8159579 Mus musculus 10090 Chordata Chordata 656 0   NTclustered gi|74213631|dbj|AK160089.1| 10090 g11854 i0 100 98.6 355 0 100 0 1 355 597 243 Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420048G17 product:signal sequence receptor, delta, full insert sequence blastn 35003 656 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
333594 333594 PRJNA1218818_P_NODE_11961_length_354_cov_2.612100_g11894_i0 PRJNA1218818 11961 354 2.6121 9.246834 Mus musculus 10090 Chordata Chordata 623 5.659999999999999e-174   NTclustered gi|354791020|gb|JN955521.1| 10090 g11894 i0 99.707 86.3983050847458 341 0 96 1 1 340 14250 14590 Mus musculus targeted non-conditional, lacZ-tagged mutant allele Pcna:tm1e(EUCOMM)Hmgu; transgenic blastn 30585 623 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
333595 333595 PRJNA1218818_P_NODE_12061_length_353_cov_1.735714_g11994_i0 PRJNA1218818 12061 353 1.735714 6.12707042 Mus musculus 10090 Chordata Chordata 652 0   NTclustered gi|1907114528|ref|XR_004938883.1| 10090 g11994 i0 100 100.079320113314 353 0 100 0 1 353 6832 7184 PREDICTED: Mus musculus RNA binding protein, fox-1 homolog (C. elegans) 2 (Rbfox2), transcript variant X24, misc_RNA blastn 35328 652 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
333596 333596 PRJNA1218818_P_NODE_12141_length_352_cov_1.573477_g12074_i0 PRJNA1218818 12141 352 1.573477 5.53863904 Mus musculus 10090 Chordata Chordata 592 1.5899999999999997e-164   NTclustered gi|1907136712|ref|XM_006498941.2| 10090 g12074 i0 98.512 106.295454545455 336 3 100 2 18 352 2844 2510 PREDICTED: Mus musculus phospholipase C, beta 4 (Plcb4), transcript variant X16, mRNA blastn 37416 592 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
333597 333597 PRJNA1218818_P_NODE_12261_length_350_cov_3.119134_g12194_i0 PRJNA1218818 12261 350 3.119134 10.916969 Mus musculus 10090 Chordata Chordata 647 0   NTclustered gi|354795634|gb|JN960135.1| 10090 g12194 i0 100 22.0828571428571 350 0 100 0 1 350 24738 24389 Mus musculus targeted non-conditional, lacZ-tagged mutant allele Cox7a2l:tm1e(EUCOMM)Hmgu; transgenic blastn 7729 647 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
333598 333598 PRJNA1218818_P_NODE_12321_length_350_cov_1.111913_g12254_i0 PRJNA1218818 12321 350 1.111913 3.8916955 Mus musculus 10090 Chordata Chordata 647 0   NTclustered gi|2648594326|ref|NM_001355745.2| 10090 g12254 i0 100 26.6342857142857 350 0 100 0 1 350 1742 2091 Mus musculus required for meiotic nuclear division 5 homolog A (Rmnd5a), transcript variant 2, mRNA blastn 9322 647 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
333599 333599 PRJNA1218818_P_NODE_12401_length_349_cov_1.217391_g12334_i0 PRJNA1218818 12401 349 1.217391 4.24869459 Mus musculus 10090 Chordata Chordata 645 1.1899999999999993e-180   NTclustered gi|6970310|dbj|AB019212.1| 10090 g12334 i0 100 76.0601719197708 349 0 100 0 1 349 1109 761 Mus musculus mRNA for syntaxin 7, complete cds blastn 26545 645 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
333600 333600 PRJNA1218818_P_NODE_12441_length_348_cov_1.789091_g12374_i0 PRJNA1218818 12441 348 1.789091 6.22603668 Mus musculus 10090 Chordata Chordata 638 1.99e-178   NTclustered gi|1907117642|ref|XM_036159899.1| 10090 g12374 i0 99.713 99.0488505747126 348 1 100 0 1 348 9474 9127 PREDICTED: Mus musculus golgin B1 (Golgb1), transcript variant X11, mRNA blastn 34469 638 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
333601 333601 PRJNA1218818_P_NODE_12521_length_347_cov_1.405109_g12454_i0 PRJNA1218818 12521 347 1.405109 4.87572823 Mus musculus 10090 Chordata Chordata 641 1.5299999999999996e-179   NTclustered gi|354792534|gb|JN957035.1| 10090 g12454 i0 100 18.0951008645533 347 0 100 0 1 347 31548 31894 Mus musculus targeted KO-first, conditional ready, lacZ-tagged mutant allele Eif4g2:tm2a(KOMP)Wtsi tm1a(KOMP)Wtsi; transgenic blastn 6279 641 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
333602 333602 PRJNA1218818_P_NODE_12801_length_344_cov_1.110701_g12734_i0 PRJNA1218818 12801 344 1.110701 3.82081144 Nuclearia simplex 154970 Root_unresolved Root_unresolved 368 2.84e-97   NTclustered gi|53829549|gb|AY582827.1| 154970 g12734 i0 86.006 99.1918604651163 343 48 99 0 1 343 43 385 Nuclearia simplex strain CCAP1552/4 ef1a mRNA, partial cds blastn 34122 368 1 Eukaryota Opisthokonta       Rotosphaerida Nucleariidae Nuclearia Nuclearia simplex
333603 333603 PRJNA1218818_P_NODE_12841_length_343_cov_1.707407_g12774_i0 PRJNA1218818 12841 343 1.707407 5.85640601 Mus musculus 10090 Chordata Chordata 634 2.5299999999999996e-177   NTclustered gi|26341107|dbj|AK050372.1| 10090 g12774 i0 100 17.1457725947522 343 0 100 0 1 343 2396 2054 Mus musculus adult male liver tumor cDNA, RIKEN full-length enriched library, clone:C730041G21 product:tropomodulin 3, full insert sequence blastn 5881 634 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
333604 333604 PRJNA1218818_P_NODE_12861_length_343_cov_1.251852_g12794_i0 PRJNA1218818 12861 343 1.251852 4.29385236 Mus musculus 10090 Chordata Chordata 634 2.5299999999999996e-177   NTclustered gi|40675691|gb|BC065102.1| 10090 g12794 i0 100 66.2565597667638 343 0 100 0 1 343 800 1142 Mus musculus nucleoporin 50, mRNA (cDNA clone MGC:85988 IMAGE:6837587), complete cds blastn 22726 634 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
333605 333605 PRJNA1218818_P_NODE_13241_length_338_cov_1.539623_g13174_i0 PRJNA1218818 13241 338 1.539623 5.20392574 Mus musculus 10090 Chordata Chordata 625 1.4999999999999999e-174   NTclustered gi|1907182847|ref|XM_030242811.2| 10090 g13174 i0 100 66.3934911242604 338 0 100 0 1 338 1220 1557 PREDICTED: Mus musculus RIKEN cDNA 1110004F10 gene (1110004F10Rik), transcript variant X2, mRNA blastn 22441 625 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
333606 333606 PRJNA1218818_P_NODE_13341_length_337_cov_1.446970_g13274_i0 PRJNA1218818 13341 337 1.44697 4.8762889 Mus musculus 10090 Chordata Chordata 623 5.369999999999999e-174   NTclustered gi|21327841|emb|AL590389.8| 10090 g13274 i0 100 35.6884272997033 337 0 100 0 1 337 38344 38680 Mouse DNA sequence from clone RP23-393F23 on chromosome 2, complete sequence blastn 12027 623 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
333607 333607 PRJNA1218818_P_NODE_13421_length_336_cov_1.171103_g13354_i0 PRJNA1218818 13421 336 1.171103 3.93490608 Mus musculus 10090 Chordata Chordata 614 3.219999999999999e-171   NTclustered gi|2707682291|ref|NM_001428917.1| 10090 g13354 i0 99.701 84.0089285714286 335 1 99 0 2 336 3392 3058 Mus musculus PDZ and LIM domain 5 (Pdlim5), transcript variant 15, mRNA blastn 28227 614 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
333608 333608 PRJNA1218818_P_NODE_13501_length_335_cov_1.351145_g13434_i0 PRJNA1218818 13501 335 1.351145 4.52633575 Mus musculus 10090 Chordata Chordata 617 2.48e-172   NTclustered gi|21955525|emb|AL669982.10| 10090 g13434 i0 100 9.88059701492537 334 0 99 0 2 335 198595 198928 Mouse DNA sequence from clone RP23-297N24 on chromosome 4, complete sequence blastn 3310 617 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
333609 333609 PRJNA1218818_P_NODE_13841_length_331_cov_1.670543_g13774_i0 PRJNA1218818 13841 331 1.6705429999999999 5.52949733 Mus musculus 10090 Chordata Chordata 612 1.14e-170   NTclustered gi|158508513|ref|NM_022563.2| 10090 g13774 i0 100 46.1268882175227 331 0 100 0 1 331 6679 6349 Mus musculus discoidin domain receptor family, member 2 (Ddr2), mRNA blastn 15268 612 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
333610 333610 PRJNA1218818_P_NODE_14021_length_329_cov_1.804688_g13954_i0 PRJNA1218818 14021 329 1.804688 5.93742352 Mus musculus 10090 Chordata Chordata 608 1.4599999999999995e-169   NTclustered gi|459683848|ref|NM_009035.5| 10090 g13954 i0 100 94.1155015197568 329 0 100 0 1 329 1783 2111 Mus musculus recombination signal binding protein for immunoglobulin kappa J region (Rbpj), transcript variant 1, mRNA blastn 30964 608 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
333611 333611 PRJNA1218818_P_NODE_14061_length_329_cov_1.203125_g13994_i0 PRJNA1218818 14061 329 1.203125 3.95828125 Mus musculus 10090 Chordata Chordata 608 1.4599999999999995e-169   NTclustered gi|253735706|ref|NM_009090.5| 10090 g13994 i0 100 58.2857142857143 329 0 100 0 1 329 1167 839 Mus musculus polymerase (RNA) II (DNA directed) polypeptide C (Polr2c), mRNA blastn 19176 608 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
333612 333612 PRJNA1218818_P_NODE_14161_length_328_cov_1.207843_g14094_i0 PRJNA1218818 14161 328 1.207843 3.96172504 Mus musculus 10090 Chordata Chordata 606 5.249999999999998e-169   NTclustered gi|1036030514|gb|AH005531.3| 10090 g14094 i0 100 33.2560975609756 328 0 100 0 1 328 2201 2528 Mus musculus strain BALB/c mitogen-induced (Fn54) mRNAs, partial cds blastn 10908 606 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
333613 333613 PRJNA1218818_P_NODE_14181_length_327_cov_3.740157_g14114_i0 PRJNA1218818 14181 327 3.740157 12.23031339 Mus musculus 10090 Chordata Chordata 604 1.8799999999999993e-168   NTclustered gi|1402371406|ref|NM_001364374.1| 10090 g14114 i0 100 77.6574923547401 327 0 100 0 1 327 606 932 Mus musculus vesicle transport through interaction with t-SNAREs 1B (Vti1b), transcript variant 2, mRNA blastn 25394 604 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
333614 333614 PRJNA1218818_P_NODE_14361_length_326_cov_1.217391_g14294_i0 PRJNA1218818 14361 326 1.217391 3.96869466 Mus musculus 10090 Chordata Chordata 601 2.43e-167   NTclustered gi|74177959|dbj|AK150696.1| 10090 g14294 i0 100 99.9447852760736 325 0 99 0 1 325 1916 1592 Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830013M11 product:golgi autoantigen, golgin subfamily a, 7, full insert sequence blastn 32582 601 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
333615 333615 PRJNA1218818_P_NODE_1441_length_965_cov_4.434978_g1394_i0 PRJNA1218818 1441 965 4.434978 42.7975377 Mus musculus 10090 Chordata Chordata 1781 0   NTclustered gi|326633193|ref|NM_001205076.1| 10090 g1394 i0 100 84.5678756476684 964 0 99 0 2 965 2757 1794 Mus musculus junctophilin 2 (Jph2), transcript variant 2, mRNA blastn 81608 1781 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
333616 333616 PRJNA1218818_P_NODE_14481_length_325_cov_1.222222_g14414_i0 PRJNA1218818 14481 325 1.222222 3.9722215 Kockovaella imperatae 4999 Fungi Fungi 182 3.73e-41   NTclustered gi|1227116395|ref|XM_022014882.1| 4999 g14414 i0 85.965 11.4523076923077 171 22 52 2 129 298 200 369 Kockovaella imperatae translation elongation factor 2 (BD324DRAFT_617108), mRNA blastn 3722 182 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Tremellales Cuniculitremaceae Kockovaella Kockovaella imperatae
333617 333617 PRJNA1218818_P_NODE_14541_length_324_cov_1.768924_g14474_i0 PRJNA1218818 14541 324 1.768924 5.73131376 Mus musculus 10090 Chordata Chordata 597 3.1199999999999987e-166   NTclustered gi|23958764|gb|BC038039.1| 10090 g14474 i0 100 83.1697530864197 323 0 99 0 1 323 2045 2367 Mus musculus lipase maturation factor 2, mRNA (cDNA clone IMAGE:4192716), with apparent retained intron blastn 26947 597 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
333618 333618 PRJNA1218818_P_NODE_14621_length_323_cov_2.472000_g14554_i0 PRJNA1218818 14621 323 2.472 7.98456 Mus musculus 10090 Chordata Chordata 586 6.72e-163   NTclustered gi|3327263|dbj|AB010828.1| 10090 g14554 i0 99.381 90.6749226006192 323 2 100 0 1 323 105 427 Mus musculus mRNA for BCNT, complete cds blastn 29288 586 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
333619 333619 PRJNA1218818_P_NODE_14761_length_322_cov_1.566265_g14694_i0 PRJNA1218818 14761 322 1.566265 5.0433733 Mus musculus 10090 Chordata Chordata 590 5.18e-164   NTclustered gi|41351650|gb|AC121079.20| 10090 g14694 i0 99.689 100.021739130435 322 1 100 0 1 322 34518 34839 Mus musculus chromosome 3, clone RP24-178P12, complete sequence blastn 32207 590 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
333620 333620 PRJNA1218818_P_NODE_14781_length_322_cov_1.236948_g14714_i0 PRJNA1218818 14781 322 1.236948 3.98297256 Mus musculus 10090 Chordata Chordata 590 5.18e-164   NTclustered gi|117558027|gb|BC127054.1| 10090 g14714 i0 99.689 98.4285714285714 322 1 100 0 1 322 1044 723 Mus musculus signal transducer and activator of transcription 6, mRNA (cDNA clone MGC:150058 IMAGE:40109712), complete cds blastn 31694 590 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
333621 333621 PRJNA1218818_P_NODE_14801_length_322_cov_1.164659_g14734_i0 PRJNA1218818 14801 322 1.1646590000000001 3.75020198 Mus musculus 10090 Chordata Chordata 595 1.1099999999999995e-165   NTclustered gi|1720357882|ref|XM_030243786.1| 10090 g14734 i0 100 99.5434782608696 322 0 100 0 1 322 819 498 PREDICTED: Mus musculus immunoglobulin superfamily, member 9 (Igsf9), transcript variant X6, mRNA blastn 32053 595 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
333622 333622 PRJNA1218818_P_NODE_14861_length_321_cov_1.653226_g14794_i0 PRJNA1218818 14861 321 1.653226 5.30685546 Mus musculus 10090 Chordata Chordata 593 3.9899999999999986e-165   NTclustered gi|1907082066|ref|XM_030246078.2| 10090 g14794 i0 100 99.981308411215 321 0 100 0 1 321 7468 7788 PREDICTED: Mus musculus zinc finger protein 672 (Zfp672), transcript variant X17, mRNA blastn 32094 593 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
333623 333623 PRJNA1218818_P_NODE_15041_length_319_cov_2.146341_g14974_i0 PRJNA1218818 15041 319 2.146341 6.84682779 Mus musculus 10090 Chordata Chordata 590 5.1299999999999986e-164   NTclustered gi|74192001|dbj|AK154938.1| 10090 g14974 i0 100 35.8181818181818 319 0 100 0 1 319 1690 2008 Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630112B04 product:unclassifiable, full insert sequence blastn 11426 590 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
333624 333624 PRJNA1218818_P_NODE_15061_length_319_cov_1.813008_g14994_i0 PRJNA1218818 15061 319 1.813008 5.78349552 Mus musculus 10090 Chordata Chordata 590 5.1299999999999986e-164   NTclustered gi|1560049539|ref|NM_001368182.1| 10090 g14994 i0 100 99.7272727272727 319 0 100 0 1 319 1366 1048 Mus musculus zinc finger with KRAB and SCAN domains 3 (Zkscan3), transcript variant 3, mRNA blastn 31813 590 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
333625 333625 PRJNA1218818_P_NODE_15161_length_318_cov_1.718367_g15094_i0 PRJNA1218818 15161 318 1.718367 5.46440706 Mus musculus 10090 Chordata Chordata 580 3.0699999999999998e-161   NTclustered gi|1907069529|ref|XM_036165972.1| 10090 g15094 i0 99.686 88.7358490566038 318 0 100 1 1 318 3755 3439 PREDICTED: Mus musculus MIA SH3 domain ER export factor 3 (Mia3), transcript variant X6, mRNA blastn 28218 580 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
333626 333626 PRJNA1218818_P_NODE_15261_length_317_cov_1.577869_g15194_i0 PRJNA1218818 15261 317 1.577869 5.00184473 Mus musculus 10090 Chordata Chordata 586 6.579999999999998e-163   NTclustered gi|112821669|ref|NM_175155.4| 10090 g15194 i0 100 95.6277602523659 317 0 100 0 1 317 177 493 Mus musculus SAM and SH3 domain containing 1 (Sash1), mRNA blastn 30314 586 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
333627 333627 PRJNA1218818_P_NODE_15321_length_316_cov_3.341564_g15254_i0 PRJNA1218818 15321 316 3.341564 10.55934224 Mus musculus 10090 Chordata Chordata 584 2.359999999999999e-162   NTclustered gi|158508513|ref|NM_022563.2| 10090 g15254 i0 100 36.2278481012658 316 0 100 0 1 316 7262 7577 Mus musculus discoidin domain receptor family, member 2 (Ddr2), mRNA blastn 11448 584 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
333628 333628 PRJNA1218818_P_NODE_15441_length_315_cov_2.028926_g15374_i0 PRJNA1218818 15441 315 2.028926 6.3911169 Mus musculus 10090 Chordata Chordata 582 8.459999999999998e-162   NTclustered gi|594191038|ref|NM_010685.4| 10090 g15374 i0 100 19.8507936507937 315 0 100 0 1 315 2980 2666 Mus musculus lysosomal-associated membrane protein 2 (Lamp2), transcript variant 2, mRNA blastn 6253 582 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
333629 333629 PRJNA1218818_P_NODE_15641_length_314_cov_1.112033_g15574_i0 PRJNA1218818 15641 314 1.112033 3.49178362 Mus musculus 10090 Chordata Chordata 580 3.0299999999999992e-161   NTclustered gi|170932555|ref|NM_145460.2| 10090 g15574 i0 100 22.2579617834395 314 0 100 0 1 314 1592 1905 Mus musculus oxidoreductase NAD-binding domain containing 1 (Oxnad1), mRNA blastn 6989 580 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
333630 333630 PRJNA1218818_P_NODE_15861_length_311_cov_3.403361_g15794_i0 PRJNA1218818 15861 311 3.403361 10.58445271 Mus musculus 10090 Chordata Chordata 575 1.3899999999999995e-159   NTclustered gi|12832427|dbj|AK002441.1| 10090 g15794 i0 100 83.7652733118971 311 0 100 0 1 311 664 354 Mus musculus adult male kidney cDNA, RIKEN full-length enriched library, clone:0610010A22 product:RIKEN cDNA 0610010A22 gene, full insert sequence blastn 26051 575 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
333631 333631 PRJNA1218818_P_NODE_15881_length_311_cov_2.163866_g15814_i0 PRJNA1218818 15881 311 2.163866 6.72962326 Mus musculus 10090 Chordata Chordata 575 1.3899999999999995e-159   NTclustered gi|31419335|gb|BC053023.1| 10090 g15814 i0 100 99.9421221864952 311 0 100 0 1 311 455 145 Mus musculus thrombospondin 3, mRNA (cDNA clone MGC:62234 IMAGE:6401682), complete cds blastn 31082 575 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
333632 333632 PRJNA1218818_P_NODE_16001_length_310_cov_2.151899_g15934_i0 PRJNA1218818 16001 310 2.151899 6.6708869 Mus musculus 10090 Chordata Chordata 573 4.999999999999998e-159   NTclustered gi|26355296|dbj|AK090203.1| 10090 g15934 i0 100 95.441935483871 310 0 100 0 1 310 335 26 Mus musculus 16 days neonate male medulla oblongata cDNA, RIKEN full-length enriched library, clone:G630016I22 product:lysyl-tRNA synthetase, full insert sequence blastn 29587 573 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
333633 333633 PRJNA1218818_P_NODE_16041_length_310_cov_1.396624_g15974_i0 PRJNA1218818 16041 310 1.396624 4.3295344 Mus musculus 10090 Chordata Chordata 573 4.999999999999998e-159   NTclustered gi|12846979|dbj|AK011085.1| 10090 g15974 i0 100 94.2806451612903 310 0 100 0 1 310 473 782 Mus musculus 13 days embryo liver cDNA, RIKEN full-length enriched library, clone:2510041L09 product:DC2 (HYDROPHOBIC PROTEIN HSF-28) (HYPOTHETICAL 16.8 KDA PROTEIN) homolog [Homo sapiens], full insert sequence blastn 29227 573 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
333634 333634 PRJNA1218818_P_NODE_16101_length_309_cov_5.906780_g16034_i0 PRJNA1218818 16101 309 5.90678 18.2519502 Mus musculus 10090 Chordata Chordata 571 1.7899999999999995e-158   NTclustered gi|12837703|dbj|AK005267.1| 10090 g16034 i0 100 82.2427184466019 309 0 100 0 1 309 317 9 Mus musculus adult male cerebellum cDNA, RIKEN full-length enriched library, clone:1500016L11 product:BC-2 protein (Putative breast adenocarcinoma marker) (32KD) (32 kDa) homolog [Homo sapiens], full insert sequence blastn 25413 571 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
333635 333635 PRJNA1218818_P_NODE_16261_length_308_cov_2.072340_g16194_i0 PRJNA1218818 16261 308 2.07234 6.3828072 Mus musculus 10090 Chordata Chordata 569 6.419999999999998e-158   NTclustered gi|568931945|ref|XM_006539202.1| 10090 g16194 i0 100 99.8701298701299 308 0 100 0 1 308 3068 2761 PREDICTED: Mus musculus Rho guanine nucleotide exchange factor 10-like (Arhgef10l), transcript variant X2, mRNA blastn 30760 569 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
333636 333636 PRJNA1218818_P_NODE_16321_length_308_cov_1.310638_g16254_i0 PRJNA1218818 16321 308 1.310638 4.03676504 Mus musculus 10090 Chordata Chordata 564 2.99e-156   NTclustered gi|1907203586|ref|XM_006528805.5| 10090 g16254 i0 99.675 20.1720779220779 308 1 100 0 1 308 2800 3107 PREDICTED: Mus musculus guanine nucleotide binding protein nucleolar 3 like (Gnl3l), transcript variant X1, mRNA blastn 6213 564 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
333637 333637 PRJNA1218818_P_NODE_16361_length_308_cov_0.982979_g16294_i0 PRJNA1218818 16361 308 0.982979 3.02757532 Mus musculus 10090 Chordata Chordata 569 6.419999999999998e-158   NTclustered gi|354793050|gb|JN957551.1| 10090 g16294 i0 100 92.6720779220779 308 0 100 0 1 308 37236 37543 Mus musculus targeted KO-first, conditional ready, lacZ-tagged mutant allele Ppp1r7:tm1a(EUCOMM)Wtsi; transgenic blastn 28543 569 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
333638 333638 PRJNA1218818_P_NODE_16401_length_307_cov_1.970085_g16334_i0 PRJNA1218818 16401 307 1.970085 6.04816095 Mus musculus 10090 Chordata Chordata 568 2.3e-157   NTclustered gi|50872569|gb|AC115723.13| 10090 g16334 i0 100 33.9478827361564 307 0 100 0 1 307 171534 171840 Mus musculus chromosome 5, clone RP23-17D18, complete sequence blastn 10422 568 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
333639 333639 PRJNA1218818_P_NODE_16481_length_307_cov_0.987179_g16414_i0 PRJNA1218818 16481 307 0.987179 3.03063953 Mus musculus 10090 Chordata Chordata 568 2.3e-157   NTclustered gi|1720422089|ref|XM_030242462.1| 10090 g16414 i0 100 98.0912052117264 307 0 100 0 1 307 6050 5744 PREDICTED: Mus musculus granule associated Rac and RHOG effector 1 (Garre1), transcript variant X7, mRNA blastn 30114 568 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
333640 333640 PRJNA1218818_P_NODE_16501_length_306_cov_2.643777_g16434_i0 PRJNA1218818 16501 306 2.643777 8.08995762 Mus musculus 10090 Chordata Chordata 566 8.239999999999998e-157   NTclustered gi|1720393668|ref|XM_006526288.3| 10090 g16434 i0 100 36.5032679738562 306 0 100 0 1 306 95 400 PREDICTED: Mus musculus proline-rich coiled-coil 1 (Prrc1), transcript variant X3, mRNA blastn 11170 566 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
333641 333641 PRJNA1218818_P_NODE_16561_length_306_cov_1.321888_g16494_i0 PRJNA1218818 16561 306 1.321888 4.04497728 Mus musculus 10090 Chordata Chordata 566 8.239999999999998e-157   NTclustered gi|37194877|gb|BC058729.1| 10090 g16494 i0 100 99.9738562091503 306 0 100 0 1 306 4191 3886 Mus musculus nucleoporin 205, mRNA (cDNA clone IMAGE:6830198), partial cds blastn 30592 566 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
333642 333642 PRJNA1218818_P_NODE_16861_length_303_cov_2.526087_g16794_i0 PRJNA1218818 16861 303 2.526087 7.65404361 Mus musculus 10090 Chordata Chordata 551 2.279999999999999e-152   NTclustered gi|1907072691|ref|XM_006513011.3| 10090 g16794 i0 99.668 66.8877887788779 301 1 99 0 3 303 2098 1798 PREDICTED: Mus musculus casein kinase 1, gamma 2 (Csnk1g2), transcript variant X1, mRNA blastn 20267 551 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
333643 333643 PRJNA1218818_P_NODE_16881_length_303_cov_1.773913_g16814_i0 PRJNA1218818 16881 303 1.773913 5.37495639 Mus musculus 10090 Chordata Chordata 560 3.79e-155   NTclustered gi|62420238|gb|AC119917.10| 10090 g16814 i0 100 42.3366336633663 303 0 100 0 1 303 97057 96755 Mus musculus chromosome 8, clone RP24-247M18, complete sequence blastn 12828 560 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
333644 333644 PRJNA1218818_P_NODE_17001_length_302_cov_1.716157_g16934_i0 PRJNA1218818 17001 302 1.716157 5.18279414 Mus musculus 10090 Chordata Chordata 558 1.36e-154   NTclustered gi|223461039|gb|BC138447.1| 10090 g16934 i0 100 99.8576158940397 302 0 100 0 1 302 683 984 Mus musculus collagen, type V, alpha 1, mRNA (cDNA clone MGC:170072 IMAGE:8861467), complete cds blastn 30157 558 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
333645 333645 PRJNA1218818_P_NODE_17181_length_301_cov_0.899123_g17114_i0 PRJNA1218818 17181 301 0.899123 2.70636023 Mus musculus 10090 Chordata Chordata 540 4.899999999999999e-149   NTclustered gi|77020524|gb|AC132404.5| 10090 g17114 i0 99.003 9.88372093023256 301 3 100 0 1 301 83848 83548 Mus musculus BAC clone RP23-328O21 from chromosome 17, complete sequence blastn 2975 540 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
333646 333646 PRJNA1218818_P_NODE_1721_length_890_cov_1.620563_g1674_i0 PRJNA1218818 1721 890 1.620563 14.4230107 Mus musculus 10090 Chordata Chordata 1639 0   NTclustered gi|1685839640|ref|NR_163805.1| 10090 g1674 i0 99.888 100.52808988764 890 1 100 0 1 890 17 906 Mus musculus prolyl 3-hydroxylase 3 (P3h3), transcript variant 3, non-coding RNA blastn 89470 1639 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
333647 333647 PRJNA1218818_P_NODE_17421_length_299_cov_1.274336_g17354_i0 PRJNA1218818 17421 299 1.274336 3.81026464 Mus musculus 10090 Chordata Chordata 547 2.9099999999999987e-151   NTclustered gi|34610367|gb|AC102626.9| 10090 g17354 i0 99.666 22.0802675585284 299 1 100 0 1 299 22686 22388 Mus musculus chromosome 12, clone RP23-456E21, complete sequence blastn 6602 547 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
333648 333648 PRJNA1218818_P_NODE_17461_length_298_cov_2.737778_g17394_i0 PRJNA1218818 17461 298 2.737778 8.15857844 Mus musculus 10090 Chordata Chordata 549 8.059999999999997e-152   NTclustered gi|354798895|gb|JN963396.1| 10090 g17394 i0 100 25.2281879194631 297 0 99 0 2 298 2783 2487 Mus musculus targeted KO-first, conditional ready, lacZ-tagged mutant allele Plk1:tm1a(EUCOMM)Hmgu; transgenic blastn 7518 549 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
333649 333649 PRJNA1218818_P_NODE_17501_length_298_cov_1.666667_g17434_i0 PRJNA1218818 17501 298 1.666667 4.96666766 Mus musculus 10090 Chordata Chordata 551 2.239999999999999e-152   NTclustered gi|26350134|dbj|AK082955.1| 10090 g17434 i0 100 94.4228187919463 298 0 100 0 1 298 303 6 Mus musculus 12 days embryo spinal cord cDNA, RIKEN full-length enriched library, clone:C530022B01 product:acid phosphatase 1, soluble, full insert sequence blastn 28138 551 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
333650 333650 PRJNA1218818_P_NODE_17581_length_297_cov_2.058036_g17514_i0 PRJNA1218818 17581 297 2.058036 6.11236692 Mus musculus 10090 Chordata Chordata 549 8.029999999999997e-152   NTclustered gi|1720371849|ref|XM_006515877.3| 10090 g17514 i0 100 100.686868686869 297 0 100 0 1 297 2725 3021 PREDICTED: Mus musculus pleckstrin homology domain containing, family G (with RhoGef domain) member 3 (Plekhg3), transcript variant X9, mRNA blastn 29904 549 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
333651 333651 PRJNA1218818_P_NODE_17621_length_297_cov_1.375000_g17554_i0 PRJNA1218818 17621 297 1.375 4.08375 Mus musculus 10090 Chordata Chordata 544 3.7299999999999996e-150   NTclustered gi|40254516|ref|NM_025331.2| 10090 g17554 i0 99.663 31.8350168350168 297 1 100 0 1 297 780 484 Mus musculus guanine nucleotide binding protein (G protein), gamma 11 (Gng11), mRNA blastn 9455 544 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
333652 333652 PRJNA1218818_P_NODE_17641_length_297_cov_1.357143_g17574_i0 PRJNA1218818 17641 297 1.357143 4.03071471 Mus musculus 10090 Chordata Chordata 549 8.029999999999997e-152   NTclustered gi|26086722|dbj|AK038760.1| 10090 g17574 i0 100 51.6767676767677 297 0 100 0 1 297 2577 2281 Mus musculus adult male hypothalamus cDNA, RIKEN full-length enriched library, clone:A230060K10 product:ATP-binding cassette, sub-family B (MDR/TAP), member 8, full insert sequence blastn 15348 549 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
333653 333653 PRJNA1218818_P_NODE_17821_length_295_cov_2.252252_g17754_i0 PRJNA1218818 17821 295 2.252252 6.6441434 Mus musculus 10090 Chordata Chordata 545 1.03e-150   NTclustered gi|354796677|gb|JN961178.1| 10090 g17754 i0 100 101.732203389831 295 0 100 0 1 295 26235 26529 Mus musculus targeted KO-first, conditional ready, lacZ-tagged mutant allele Gng12:tm1a(EUCOMM)Wtsi; transgenic blastn 30011 545 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
333654 333654 PRJNA1218818_P_NODE_17841_length_295_cov_1.891892_g17774_i0 PRJNA1218818 17841 295 1.891892 5.5810814 Mus musculus 10090 Chordata Chordata 540 4.79e-149   NTclustered gi|20987964|gb|BC030032.1| 10090 g17774 i0 100 16.6542372881356 292 0 99 0 4 295 1908 1617 Mus musculus dynein light chain Tctex-type 3, mRNA (cDNA clone MGC:41029 IMAGE:1332100), complete cds blastn 4913 540 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
333655 333655 PRJNA1218818_P_NODE_17941_length_294_cov_2.090498_g17874_i0 PRJNA1218818 17941 294 2.090498 6.14606412 Mus musculus 10090 Chordata Chordata 544 3.69e-150   NTclustered gi|1907138226|ref|XM_030250015.2| 10090 g17874 i0 100 99.0136054421769 294 0 100 0 1 294 416 709 PREDICTED: Mus musculus Rab9 effector protein with kelch motifs (Rabepk), transcript variant X2, mRNA blastn 29110 544 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
333656 333656 PRJNA1218818_P_NODE_1801_length_873_cov_2.070000_g1752_i0 PRJNA1218818 1801 873 2.07 18.0711 Mus musculus 10090 Chordata Chordata 1613 0   NTclustered gi|2496840175|ref|NM_001420116.1| 10090 g1752 i0 100 99.9862542955326 873 0 100 0 1 873 1813 941 Mus musculus microtubule-associated protein 4 (Map4), transcript variant 9, mRNA blastn 87288 1613 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
333657 333657 PRJNA1218818_P_NODE_18021_length_294_cov_1.248869_g17954_i0 PRJNA1218818 18021 294 1.248869 3.67167486 Mus musculus 10090 Chordata Chordata 544 3.69e-150   NTclustered gi|1720360717|ref|XM_030244953.1| 10090 g17954 i0 100 57.4013605442177 294 0 100 0 1 294 784 491 PREDICTED: Mus musculus serglycin (Srgn), transcript variant X4, mRNA blastn 16876 544 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
333658 333658 PRJNA1218818_P_NODE_18061_length_293_cov_3.250000_g17994_i0 PRJNA1218818 18061 293 3.25 9.5225 Mus musculus 10090 Chordata Chordata 542 1.32e-149   NTclustered gi|354796390|gb|JN960891.1| 10090 g17994 i0 100 37.1194539249147 293 0 100 0 1 293 27079 27371 Mus musculus targeted KO-first, conditional ready, lacZ-tagged mutant allele Il11ra1:tm1a(EUCOMM)Wtsi; transgenic blastn 10876 542 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
333659 333659 PRJNA1218818_P_NODE_18221_length_292_cov_1.757991_g18154_i0 PRJNA1218818 18221 292 1.757991 5.13333372 Mus musculus 10090 Chordata Chordata 540 4.74e-149   NTclustered gi|392933856|ref|NM_027327.1| 10090 g18154 i0 100 39.9554794520548 292 0 100 0 1 292 652 361 Mus musculus negative regulator of P-body association (Nbdy), mRNA blastn 11667 540 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
333660 333660 PRJNA1218818_P_NODE_18461_length_290_cov_3.926267_g18394_i0 PRJNA1218818 18461 290 3.926267 11.3861743 Mus musculus 10090 Chordata Chordata 536 6.079999999999999e-148   NTclustered gi|28173252|gb|AC125157.4| 10090 g18394 i0 100 5.6448275862069 290 0 100 0 1 290 170069 169780 Mus musculus BAC clone RP24-390G17 from chromosome 18, complete sequence blastn 1637 536 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
333661 333661 PRJNA1218818_P_NODE_1861_length_858_cov_8.543949_g1811_i0 PRJNA1218818 1861 858 8.543949 73.30708242 Mus musculus 10090 Chordata Chordata 1585 0   NTclustered gi|117606334|ref|NM_011340.3| 10090 g1811 i0 100 95.2738927738928 858 0 100 0 1 858 1464 607 Mus musculus serine (or cysteine) peptidase inhibitor, clade F, member 1 (Serpinf1), mRNA blastn 81745 1585 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
333662 333662 PRJNA1218818_P_NODE_18641_length_289_cov_2.129630_g18574_i0 PRJNA1218818 18641 289 2.12963 6.1546307 Mus musculus 10090 Chordata Chordata 534 2.18e-147   NTclustered gi|2592799542|ref|NM_011520.4| 10090 g18574 i0 100 47.9480968858132 289 0 100 0 1 289 2392 2680 Mus musculus syndecan 3 (Sdc3), transcript variant 1, mRNA blastn 13857 534 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
333663 333663 PRJNA1218818_P_NODE_18701_length_289_cov_1.412037_g18634_i0 PRJNA1218818 18701 289 1.412037 4.08078693 Mus musculus 10090 Chordata Chordata 534 2.18e-147   NTclustered gi|2289442712|ref|NM_001411421.1| 10090 g18634 i0 100 99.4740484429066 289 0 100 0 1 289 909 621 Mus musculus neutrophil cytosolic factor 4 (Ncf4), transcript variant 2, mRNA blastn 28748 534 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
333664 333664 PRJNA1218818_P_NODE_18761_length_288_cov_2.637209_g18694_i0 PRJNA1218818 18761 288 2.637209 7.59516192 Mus musculus 10090 Chordata Chordata 532 7.8e-147   NTclustered gi|354785702|gb|JN950203.1| 10090 g18694 i0 100 24.4340277777778 288 0 100 0 1 288 33823 34110 Mus musculus targeted KO-first, conditional ready, lacZ-tagged mutant allele Fads1:tm1a(EUCOMM)Hmgu; transgenic blastn 7037 532 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
333665 333665 PRJNA1218818_P_NODE_18801_length_288_cov_1.581395_g18734_i0 PRJNA1218818 18801 288 1.581395 4.5544176 Mus musculus 10090 Chordata Chordata 532 7.8e-147   NTclustered gi|87116673|ref|NM_172647.2| 10090 g18734 i0 100 38.21875 288 0 100 0 1 288 266 553 Mus musculus F11 receptor (F11r), mRNA blastn 11007 532 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus

Next page

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;