RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

7 rows where bioproject = "PRJNA1218818" and tax_phylum = "Euglenozoa"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Euglenozoa · 7 ✖

tax_clade 1

bioproject 1

  • PRJNA1218818 · 7 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1608491 1608491 PRJNA1218818_P_NODE_26662_length_246_cov_0.890173_g26595_i0 PRJNA1218818 26662 246 0.890173 2.18982558 Kinetoplastea 5653 Euglenozoa other_Eukaryota 132 3.1699999999999996e-35   NR CUG93860.1 75058 g26595 i0 80.3 2.91463414634146 76 15 92.7 0 17 244 237 312 CUG93860.1 actin, putative [Bodo saltans] diamond 717 132 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
13087499 13087499 PRJNA1218818_P_NODE_26031_length_247_cov_0.885057_g25964_i0 PRJNA1218818 26031 247 0.885057 2.18609079 Kinetoplastea 5653 Euglenozoa other_Eukaryota 134 5.8899999999999994e-37   NR CUG06475.1 75058 g25964 i0 74.4 2.98785425101215 82 21 99.6 0 246 1 79 160 CUG06475.1 40S ribosomal protein S2, putative [Bodo saltans] diamond 738 135 0.992592592592593 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
22010374 22010374 PRJNA1218818_P_NODE_15198_length_318_cov_1.232653_g15131_i0 PRJNA1218818 15198 318 1.232653 3.91983654 Neobodo designis 312471 Euglenozoa other_Eukaryota 588 1.84e-163   NTclustered gi|1172045910|gb|KY859412.1| 312471 g15131 i0 100 91.0754716981132 318 0 100 0 1 318 620 937 Neobodo designis breed flagellate small subunit ribosomal RNA gene, partial sequence blastn 28962 588 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida   Neobodo Neobodo designis
22010533 22010533 PRJNA1218818_P_NODE_28218_length_242_cov_1.313609_g28151_i0 PRJNA1218818 28218 242 1.313609 3.17893378 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 141 1.58e-39   NR EPY24367.1 28005 g28151 i0 78.8 163.574380165289 80 17 99.2 0 3 242 139 218 EPY24367.1 small subunit ribosomal protein S2e [Strigomonas culicis] diamond 39585 142 0.992957746478873 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Strigomonas Strigomonas culicis
26806739 26806739 PRJNA1218818_P_NODE_26381_length_246_cov_0.890173_g26314_i0 PRJNA1218818 26381 246 0.890173 2.18982558 Leishmania 5658 Euglenozoa other_Eukaryota 134 1.3e-36   NR TPP51915.1 5661 g26314 i0 81.7 12 82 15 100 0 1 246 92 173 TPP51915.1 60S ribosomal protein L7 family protein [Leishmania donovani] diamond 2952 134 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania donovani
30736149 30736149 PRJNA1218818_P_NODE_27494_length_244_cov_0.900585_g27427_i0 PRJNA1218818 27494 244 0.900585 2.1974274 Leishmania martiniquensis 1580590 Euglenozoa other_Eukaryota 102 4.039999999999999e-23   NR XP_067177255.1 1580590 g27427 i0 56.3 0.983606557377049 80 35 98.4 0 242 3 174 253 XP_067177255.1 hypothetical protein LSCM1_03093 [Leishmania martiniquensis] diamond 240 102 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania martiniquensis
31039672 31039672 PRJNA1218818_P_NODE_28355_length_242_cov_0.911243_g28288_i0 PRJNA1218818 28355 242 0.911243 2.20520806 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 80.1 2.95e-16   NR EPY30488.1 28005 g28288 i0 56.1 8.1198347107438 66 29 81.8 0 242 45 152 217 EPY30488.1 small subunit ribosomal protein S3e [Strigomonas culicis] diamond 1965 80.1 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Strigomonas Strigomonas culicis

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;