RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJNA1218818" and tax_phylum = "Arthropoda"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Arthropoda · 6 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1218818 · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10537565 10537565 PRJNA1218818_P_NODE_17909_length_295_cov_1.099099_g17842_i0 PRJNA1218818 17909 295 1.099099 3.24234205 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 124 5.17e-34   NR XP_013774893.1 6850 g17842 i0 69.9 17.4305084745763 93 28 94.6 0 3 281 33 125 XP_013774893.1 60S ribosomal protein L21-like [Limulus polyphemus] diamond 5142 125 0.992 Eukaryota Opisthokonta Metazoa Arthropoda Merostomata Xiphosura Limulidae Limulus Limulus polyphemus
10537619 10537619 PRJNA1218818_P_NODE_22749_length_260_cov_1.235294_g22682_i0 PRJNA1218818 22749 260 1.235294 3.2117644 Idotea baltica 82763 Arthropoda Arthropoda 105 9.39e-26   NR MCL4122108.1 82763 g22682 i0 63.5 0.980769230769231 85 31 98.1 0 257 3 9 93 MCL4122108.1 hypothetical protein [Idotea baltica] diamond 255 105 1 Eukaryota Opisthokonta Metazoa Arthropoda Malacostraca Isopoda Idoteidae Idotea Idotea baltica
16348837 16348837 PRJNA1218818_P_NODE_27293_length_244_cov_0.900585_g27226_i0 PRJNA1218818 27293 244 0.900585 2.1974274 root 1 Root_unresolved Root_unresolved 446 8.639999999999999e-121   NTclustered gi|1962580014|emb|OC914861.1| 334625 g27226 i0 99.59 10.4385245901639 244 1 100 0 1 244 1824 2067 Oppiella nova blastn 2547 446 1 Eukaryota Opisthokonta Metazoa Arthropoda Arachnida Sarcoptiformes Oppiidae Oppiella Oppiella nova
23998416 23998416 PRJNA1218818_P_NODE_13839_length_331_cov_1.674419_g13772_i0 PRJNA1218818 13839 331 1.674419 5.54232689 Insecta 50557 Arthropoda Arthropoda 363 1.2699999999999999e-95   NTclustered gi|1484460828|ref|XM_026611478.1| 7515 g13772 i0 86.486 97.4864048338369 333 41 100 4 1 331 680 350 PREDICTED: Ctenocephalides felis actin, muscle (LOC113370787), mRNA blastn 32268 363 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Siphonaptera Pulicidae Ctenocephalides Ctenocephalides felis
28935984 28935984 PRJNA1218818_P_NODE_27028_length_245_cov_0.895349_g26961_i0 PRJNA1218818 27028 245 0.895349 2.19360505 Molorchus minor 1323400 Arthropoda Arthropoda 69.3 1.67e-11   NR KAJ8945284.1 1323400 g26961 i0 50.7 0.918367346938776 75 33 86.9 1 19 231 515 589 KAJ8945284.1 hypothetical protein NQ317_001091 [Molorchus minor] diamond 225 69.3 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Coleoptera Cerambycidae Molorchus Molorchus minor
29883345 29883345 PRJNA1218818_P_NODE_27931_length_243_cov_0.905882_g27864_i0 PRJNA1218818 27931 243 0.905882 2.20129326 Panulirus ornatus 150431 Arthropoda Arthropoda 102 3.81e-25   NR XP_071532365.1 150431 g27864 i0 57.7 2.88888888888889 78 33 96.3 0 243 10 45 122 XP_071532365.1 large ribosomal subunit protein uL6 [Panulirus ornatus] diamond 702 102 1 Eukaryota Opisthokonta Metazoa Arthropoda Malacostraca Decapoda Palinuridae Panulirus Panulirus ornatus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;