RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1218818" and tax_clade = "Cyanobacteriota/Melainabacteria group"

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analysis 2

tax_superkingdom 1

tax_kingdom 1

tax_clade 1

  • Cyanobacteriota/Melainabacteria group · 2 ✖

bioproject 1

  • PRJNA1218818 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16910938 16910938 PRJNA1218818_P_NODE_28814_length_241_cov_0.916667_g28747_i0 PRJNA1218818 28814 241 0.916667 2.20916747 Gloeocapsa sp. PCC 7428 1173026 Bacteria Bacteria 435 1.84e-117   NTclustered gi|485099145|ref|NR_102540.1| 1173026 g28747 i0 99.17 112.278008298755 241 2 100 0 1 241 957 1197 Gloeocapsa sp. PCC 7428 strain PCC 7428 23S ribosomal RNA, complete sequence blastn 27059 435 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Chroococcales Chroococcaceae Gloeocapsa Gloeocapsa sp. PCC 7428
29598692 29598692 PRJNA1218818_P_NODE_24990_length_249_cov_0.875000_g24923_i0 PRJNA1218818 24990 249 0.875 2.17875 Candidatus Obscuribacter sp. 2711154 Bacteria Bacteria 98.6 1.0399999999999997e-23   NR MBL8086383.1 2711154 g24923 i0 74.2 0.795180722891566 66 17 79.5 0 202 5 56 121 MBL8086383.1 ankyrin repeat domain-containing protein [Candidatus Obscuribacter sp.] diamond 198 98.6 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales Candidatus Obscuribacteraceae Candidatus Obscuribacter Candidatus Obscuribacter sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;