RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1182301" and tax_phylum = "Candidatus Sumerlaeota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Sumerlaeota · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1182301 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26913945 26913945 PRJNA1182301_P_NODE_20822_length_288_cov_1.167442_g20697_i0 PRJNA1182301 20822 288 1.167442 3.36223296 Candidatus Sumerlaea chitinivorans 2250252 Bacteria Bacteria 50.8 3.9e-5   NR AXA35692.1 2250252 g20697 i0 65.7 0.364583333333333 35 12 36.5 0 63 167 131 165 AXA35692.1 NADH-ubiquinone oxidoreductase chain J [Candidatus Sumerlaea chitinivorans] diamond 105 50.8 1 Bacteria Bacteria candidate phyla   Candidatus Sumerlaeota Candidatus Sumerlaeia Candidatus Sumerlaeales Candidatus Sumerlaeaceae Candidatus Sumerlaea Candidatus Sumerlaea chitinivorans
30893886 30893886 PRJNA1182301_P_NODE_37474_length_265_cov_1.604167_g37349_i0 PRJNA1182301 37474 265 1.604167 4.25104255 Candidatus Sumerlaeaceae bacterium 2315423 Bacteria Bacteria 115 1.31e-29   NR MCX7624810.1 2315423 g37349 i0 80 1.58490566037736 70 14 79.2 0 2 211 172 241 MCX7624810.1 HD domain-containing protein [Candidatus Sumerlaeaceae bacterium] diamond 420 115 1 Bacteria Bacteria candidate phyla   Candidatus Sumerlaeota Candidatus Sumerlaeia Candidatus Sumerlaeales Candidatus Sumerlaeaceae   Candidatus Sumerlaeaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;