RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

48,587 rows where bioproject = "PRJNA1182301"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 4

analysis 2

bioproject 1

  • PRJNA1182301 · 48,587 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
318017 318017 PRJNA1182301_P_NODE_1001_length_769_cov_2.545977_g888_i0 PRJNA1182301 1001 769 2.545977 19.57856313 Achromobacter insuavis 1287735 Bacteria Bacteria 1365 0   NTclustered gi|2715113494|gb|CP150896.1| 1287735 g888 i0 98.701 95.1547464239272 770 9 100 1 1 769 4544085 4543316 Achromobacter insuavis strain TVCGH7788 chromosome, complete genome blastn 73174 1365 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Alcaligenaceae Achromobacter Achromobacter insuavis
318018 318018 PRJNA1182301_P_NODE_10021_length_346_cov_3.065934_g9896_i0 PRJNA1182301 10021 346 3.065934 10.60813164 Mus musculus 10090 Chordata Chordata 640 5.4999999999999996e-179   NTclustered gi|74138426|dbj|AK165159.1| 10090 g9896 i0 100 28.8323699421965 346 0 100 0 1 346 2862 3207 Mus musculus 8 cells embryo 8 cells cDNA, RIKEN full-length enriched library, clone:E860006G23 product:Hypothetical mitochondrial energy transfer proteins homolog [Mus musculus], full insert sequence blastn 9976 640 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
318019 318019 PRJNA1182301_P_NODE_10041_length_346_cov_2.509158_g9916_i0 PRJNA1182301 10041 346 2.5091580000000002 8.68168668 Methylorubrum sp. B1-46 2897334 Bacteria Bacteria 453 7.680000000000001e-123   NTclustered gi|2161694424|gb|CP088247.1| 2897334 g9916 i0 91.592 9.9971098265896 333 21 96 4 8 339 4506299 4506625 Methylorubrum sp. B1-46 chromosome, complete genome blastn 3459 453 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Methylobacteriaceae Methylorubrum Methylorubrum sp. B1-46
318020 318020 PRJNA1182301_P_NODE_10081_length_346_cov_1.128205_g9956_i0 PRJNA1182301 10081 346 1.128205 3.9035893 Achromobacter deleyi 1353891 Bacteria Bacteria 623 5.529999999999999e-174   NTclustered gi|1948614726|gb|CP065997.1| 1353891 g9956 i0 99.133 2.52890173410405 346 3 100 0 1 346 4674416 4674761 Achromobacter deleyi strain FDAARGOS_1050 chromosome, complete genome blastn 875 623 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Alcaligenaceae Achromobacter Achromobacter deleyi
318021 318021 PRJNA1182301_P_NODE_10101_length_345_cov_3.580882_g9976_i0 PRJNA1182301 10101 345 3.580882 12.3540429 Mus musculus 10090 Chordata Chordata 632 9.17e-177   NTclustered gi|12805188|gb|BC002053.1| 10090 g9976 i0 99.71 98.6666666666667 345 1 100 0 1 345 709 1053 Mus musculus capping protein (actin filament) muscle Z-line, beta, mRNA (cDNA clone MGC:6082 IMAGE:3590980), complete cds blastn 34040 632 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
318022 318022 PRJNA1182301_P_NODE_10141_length_345_cov_2.205882_g10016_i0 PRJNA1182301 10141 345 2.205882 7.6102929 Mus musculus 10090 Chordata Chordata 638 1.97e-178   NTclustered gi|2414128253|ref|NM_133765.5| 10090 g10016 i0 100 65.0260869565217 345 0 100 0 1 345 1505 1849 Mus musculus F-box protein 31 (Fbxo31), transcript variant 1, mRNA blastn 22434 638 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
318023 318023 PRJNA1182301_P_NODE_10201_length_344_cov_3.361624_g10076_i0 PRJNA1182301 10201 344 3.361624 11.56398656 Mus musculus 10090 Chordata Chordata 590 5.58e-164   NTclustered gi|1907193485|ref|XR_388120.4| 10090 g10076 i0 97.093 3.59302325581395 344 7 100 1 1 344 776 1116 PREDICTED: Mus musculus RIKEN cDNA 5033426O07 gene (5033426O07Rik), transcript variant X1, ncRNA blastn 1236 590 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
318024 318024 PRJNA1182301_P_NODE_1021_length_763_cov_2.117391_g907_i0 PRJNA1182301 1021 763 2.117391 16.15569333 Achromobacter sp. EB05 3142974 Bacteria Bacteria 1327 0   NTclustered gi|2735166093|gb|CP155917.1| 3142974 g907 i0 98.034 70.737876802097 763 15 100 0 1 763 2496905 2497667 Achromobacter sp. EB05 chromosome, complete genome blastn 53973 1327 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Alcaligenaceae Achromobacter Achromobacter sp. EB05
318025 318025 PRJNA1182301_P_NODE_10241_length_344_cov_1.852399_g10116_i0 PRJNA1182301 10241 344 1.852399 6.37225256 Pseudomonas putida 303 Bacteria Bacteria 630 3.289999999999999e-176   NTclustered gi|1910192466|gb|CP061723.1| 303 g10116 i0 99.709 9.11918604651163 344 1 100 0 1 344 3050324 3049981 Pseudomonas putida strain ZXPA-20 chromosome, complete genome blastn 3137 630 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Pseudomonadales Pseudomonadaceae Pseudomonas Pseudomonas putida
318026 318026 PRJNA1182301_P_NODE_10341_length_343_cov_2.059259_g10216_i0 PRJNA1182301 10341 343 2.059259 7.06325837 Cupriavidus nantongensis 1796606 Bacteria Bacteria 296 1.36e-75   NTclustered gi|2797101435|gb|CP168302.1| 1796606 g10216 i0 82.635 7.7463556851312 334 58 97 0 1 334 293329 293662 Cupriavidus nantongensis strain HB4B5 chromosome 1, complete sequence blastn 2657 296 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Burkholderiaceae Cupriavidus Cupriavidus nantongensis
318027 318027 PRJNA1182301_P_NODE_10361_length_343_cov_1.711111_g10236_i0 PRJNA1182301 10361 343 1.711111 5.86911073 Mus musculus 10090 Chordata Chordata 634 2.5299999999999996e-177   NTclustered gi|71533508|gb|AC161876.3| 10090 g10236 i0 100 20.2332361516035 343 0 100 0 1 343 24291 24633 Mus musculus BAC clone RP24-388H6 from chromosome 1, complete sequence blastn 6940 634 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
318028 318028 PRJNA1182301_P_NODE_10401_length_342_cov_3.353160_g10276_i0 PRJNA1182301 10401 342 3.35316 11.4678072 Mus musculus 10090 Chordata Chordata 632 9.079999999999999e-177   NTclustered gi|1907076466|ref|XM_017314044.3| 10090 g10276 i0 100 99.8508771929825 342 0 100 0 1 342 1918 2259 PREDICTED: Mus musculus spectrin repeat containing, nuclear envelope 1 (Syne1), transcript variant X10, mRNA blastn 34149 632 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
318029 318029 PRJNA1182301_P_NODE_10421_length_342_cov_2.524164_g10296_i0 PRJNA1182301 10421 342 2.524164 8.63264088 Mus musculus 10090 Chordata Chordata 630 3.259999999999999e-176   NTclustered gi|26337692|dbj|AK045920.1| 10090 g10296 i0 100 56.6520467836257 341 0 99 0 2 342 1205 865 Mus musculus adult male corpora quadrigemina cDNA, RIKEN full-length enriched library, clone:B230323G14 product:calcium binding protein P22, full insert sequence blastn 19375 630 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
318030 318030 PRJNA1182301_P_NODE_10481_length_341_cov_4.417910_g10356_i0 PRJNA1182301 10481 341 4.41791 15.0650731 Achromobacter insuavis 1287735 Bacteria Bacteria 621 1.9599999999999997e-173   NTclustered gi|2715113494|gb|CP150896.1| 1287735 g10356 i0 100 70.1436950146628 336 0 99 0 1 336 5709230 5709565 Achromobacter insuavis strain TVCGH7788 chromosome, complete genome blastn 23919 621 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Alcaligenaceae Achromobacter Achromobacter insuavis
318031 318031 PRJNA1182301_P_NODE_10561_length_341_cov_1.436567_g10436_i0 PRJNA1182301 10561 341 1.436567 4.89869347 Castellaniella ginsengisoli 546114 Bacteria Bacteria 381 3.619999999999999e-101   NTclustered gi|2780333527|gb|CP158255.1| 546114 g10436 i0 86.804 23.366568914956 341 45 100 0 1 341 244706 245046 Castellaniella ginsengisoli strain 151108 chromosome blastn 7968 381 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Alcaligenaceae Castellaniella Castellaniella ginsengisoli
318032 318032 PRJNA1182301_P_NODE_10601_length_340_cov_2.486891_g10476_i0 PRJNA1182301 10601 340 2.486891 8.4554294 Castellaniella defragrans 75697 Bacteria Bacteria 612 1.17e-170   NTclustered gi|589264544|emb|HG916765.1| 1437824 g10476 i0 99.118 24.5205882352941 340 3 100 0 1 340 2909062 2909401 Castellaniella defragrans 65Phen complete genome blastn 8337 612 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Alcaligenaceae Castellaniella Castellaniella defragrans
318033 318033 PRJNA1182301_P_NODE_1061_length_749_cov_5.479290_g947_i0 PRJNA1182301 1061 749 5.47929 41.0398821 Mus musculus 10090 Chordata Chordata 1384 0   NTclustered gi|1907138935|ref|XM_006499311.2| 10090 g947 i0 100 71.260347129506 749 0 100 0 1 749 317 1065 PREDICTED: Mus musculus neurensin 2 (Nrsn2), transcript variant X2, mRNA blastn 53374 1384 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
318034 318034 PRJNA1182301_P_NODE_10621_length_340_cov_1.943820_g10496_i0 PRJNA1182301 10621 340 1.94382 6.608988 Castellaniella defragrans 75697 Bacteria Bacteria 628 1.1699999999999999e-175   NTclustered gi|589264544|emb|HG916765.1| 1437824 g10496 i0 100 1 340 0 100 0 1 340 1081616 1081955 Castellaniella defragrans 65Phen complete genome blastn 340 628 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Alcaligenaceae Castellaniella Castellaniella defragrans
318035 318035 PRJNA1182301_P_NODE_10641_length_340_cov_1.711610_g10516_i0 PRJNA1182301 10641 340 1.71161 5.819474 Bradyrhizobium sp. 191 2782659 Bacteria Bacteria 220 8.32e-53   NTclustered gi|2230098675|gb|CP064692.1| 2782659 g10516 i0 80.919 6.10294117647059 283 51 82 2 1 280 7306864 7306582 Bradyrhizobium sp. 191 chromosome, complete genome blastn 2075 220 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium Bradyrhizobium sp. 191
318036 318036 PRJNA1182301_P_NODE_10681_length_339_cov_4.218045_g10556_i0 PRJNA1182301 10681 339 4.218045 14.29917255 Mus musculus 10090 Chordata Chordata 627 4.1799999999999996e-175   NTclustered gi|1907132142|ref|XR_388254.5| 10090 g10556 i0 100 100.082595870206 339 0 100 0 1 339 1033 695 PREDICTED: Mus musculus sorting nexin 32 (Snx32), transcript variant X6, misc_RNA blastn 33928 627 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
318037 318037 PRJNA1182301_P_NODE_10721_length_339_cov_2.315789_g10596_i0 PRJNA1182301 10721 339 2.315789 7.85052471 Achromobacter sp. EB05 3142974 Bacteria Bacteria 604 1.9599999999999993e-168   NTclustered gi|2735166093|gb|CP155917.1| 3142974 g10596 i0 98.82 67.0530973451327 339 4 100 0 1 339 456554 456216 Achromobacter sp. EB05 chromosome, complete genome blastn 22731 604 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Alcaligenaceae Achromobacter Achromobacter sp. EB05
318038 318038 PRJNA1182301_P_NODE_10741_length_339_cov_1.917293_g10616_i0 PRJNA1182301 10741 339 1.917293 6.49962327 Achromobacter deleyi 1353891 Bacteria Bacteria 560 4.3e-155   NTclustered gi|1948614726|gb|CP065997.1| 1353891 g10616 i0 96.46 2.09144542772861 339 12 100 0 1 339 5377711 5377373 Achromobacter deleyi strain FDAARGOS_1050 chromosome, complete genome blastn 709 560 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Alcaligenaceae Achromobacter Achromobacter deleyi
318039 318039 PRJNA1182301_P_NODE_10781_length_338_cov_4.033962_g10656_i0 PRJNA1182301 10781 338 4.033962 13.63479156 Achromobacter deleyi 1353891 Bacteria Bacteria 608 1.509999999999999e-169   NTclustered gi|1948614726|gb|CP065997.1| 1353891 g10656 i0 99.112 97.603550295858 338 3 100 0 1 338 4878934 4879271 Achromobacter deleyi strain FDAARGOS_1050 chromosome, complete genome blastn 32990 608 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Alcaligenaceae Achromobacter Achromobacter deleyi
318040 318040 PRJNA1182301_P_NODE_10801_length_338_cov_2.796226_g10676_i0 PRJNA1182301 10801 338 2.796226 9.45124388 Mus musculus 10090 Chordata Chordata 625 1.4999999999999999e-174   NTclustered gi|44890774|gb|BC067051.1| 10090 g10676 i0 100 18.896449704142 338 0 100 0 1 338 4110 3773 Mus musculus kinesin family member 5C, mRNA (cDNA clone MGC:86067 IMAGE:30536079), complete cds blastn 6387 625 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
318041 318041 PRJNA1182301_P_NODE_10821_length_338_cov_2.286792_g10696_i0 PRJNA1182301 10821 338 2.286792 7.72935696 Mus musculus 10090 Chordata Chordata 625 1.4999999999999999e-174   NTclustered gi|354789175|gb|JN953676.1| 10090 g10696 i0 100 45.7514792899408 338 0 100 0 1 338 28508 28845 Mus musculus targeted non-conditional, lacZ-tagged mutant allele Unc50:tm1e(EUCOMM)Hmgu; transgenic blastn 15464 625 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
318042 318042 PRJNA1182301_P_NODE_10881_length_337_cov_3.405303_g10756_i0 PRJNA1182301 10881 337 3.405303 11.47587111 Mus musculus 10090 Chordata Chordata 623 5.369999999999999e-174   NTclustered gi|1907102009|ref|XM_011245094.4| 10090 g10756 i0 100 43.2373887240356 337 0 100 0 1 337 7411 7075 PREDICTED: Mus musculus sodium leak channel, non-selective (Nalcn), transcript variant X2, mRNA blastn 14571 623 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
318043 318043 PRJNA1182301_P_NODE_10901_length_337_cov_2.628788_g10776_i0 PRJNA1182301 10901 337 2.628788 8.85901556 Achromobacter insuavis 1287735 Bacteria Bacteria 601 2.52e-167   NTclustered gi|2715113494|gb|CP150896.1| 1287735 g10776 i0 98.813 99.9881305637982 337 4 100 0 1 337 636152 635816 Achromobacter insuavis strain TVCGH7788 chromosome, complete genome blastn 33696 601 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Alcaligenaceae Achromobacter Achromobacter insuavis
318044 318044 PRJNA1182301_P_NODE_10921_length_337_cov_2.250000_g10796_i0 PRJNA1182301 10921 337 2.25 7.5825 Achromobacter insuavis 1287735 Bacteria Bacteria 595 1.1699999999999996e-165   NTclustered gi|2715113494|gb|CP150896.1| 1287735 g10796 i0 98.516 22.1691394658754 337 5 100 0 1 337 3929499 3929163 Achromobacter insuavis strain TVCGH7788 chromosome, complete genome blastn 7471 595 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Alcaligenaceae Achromobacter Achromobacter insuavis
318045 318045 PRJNA1182301_P_NODE_10941_length_337_cov_1.954545_g10816_i0 PRJNA1182301 10941 337 1.954545 6.58681665 Rhodopseudomonas boonkerdii 475937 Bacteria Bacteria 514 3.37e-141   NTclustered gi|2164970004|gb|CP036537.1| 475937 g10816 i0 94.578 92.1186943620178 332 18 99 0 6 337 4117648 4117317 Rhodopseudomonas boonkerdii strain NS23 chromosome, complete genome blastn 31044 514 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Rhodopseudomonas Rhodopseudomonas boonkerdii
318046 318046 PRJNA1182301_P_NODE_10961_length_337_cov_1.549242_g10836_i0 PRJNA1182301 10961 337 1.549242 5.22094554 Achromobacter insuavis 1287735 Bacteria Bacteria 606 5.409999999999998e-169   NTclustered gi|2715113494|gb|CP150896.1| 1287735 g10836 i0 99.11 44.7655786350148 337 3 100 0 1 337 6467309 6466973 Achromobacter insuavis strain TVCGH7788 chromosome, complete genome blastn 15086 606 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Alcaligenaceae Achromobacter Achromobacter insuavis
318047 318047 PRJNA1182301_P_NODE_11001_length_336_cov_3.083650_g10876_i0 PRJNA1182301 11001 336 3.08365 10.361064 Achromobacter insuavis 1287735 Bacteria Bacteria 595 1.1699999999999996e-165   NTclustered gi|2715113494|gb|CP150896.1| 1287735 g10876 i0 98.802 98.4970238095238 334 4 99 0 3 336 6595120 6595453 Achromobacter insuavis strain TVCGH7788 chromosome, complete genome blastn 33095 595 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Alcaligenaceae Achromobacter Achromobacter insuavis
318048 318048 PRJNA1182301_P_NODE_11021_length_336_cov_2.380228_g10896_i0 PRJNA1182301 11021 336 2.380228 7.99756608 Mus musculus 10090 Chordata Chordata 621 1.9299999999999997e-173   NTclustered gi|26086137|dbj|AK037878.1| 10090 g10896 i0 100 11.625 336 0 100 0 1 336 1985 2320 Mus musculus 16 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A130058M11 product:inferred: RIKEN cDNA 1810011E08 gene / putative [Mus musculus], full insert sequence blastn 3906 621 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
318049 318049 PRJNA1182301_P_NODE_11061_length_336_cov_1.646388_g10936_i0 PRJNA1182301 11061 336 1.646388 5.53186368 Castellaniella ginsengisoli 546114 Bacteria Bacteria 505 2.0199999999999995e-138   NTclustered gi|2780387703|gb|CP158270.1| 546114 g10936 i0 93.75 17 336 21 100 0 1 336 2229138 2228803 Castellaniella ginsengisoli strain 130308 chromosome blastn 5712 505 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Alcaligenaceae Castellaniella Castellaniella ginsengisoli
318050 318050 PRJNA1182301_P_NODE_11081_length_336_cov_1.163498_g10956_i0 PRJNA1182301 11081 336 1.163498 3.90935328 Castellaniella defragrans 75697 Bacteria Bacteria 610 4.17e-170   NTclustered gi|589264544|emb|HG916765.1| 1437824 g10956 i0 99.405 1.16964285714286 336 2 100 0 1 336 1214918 1215253 Castellaniella defragrans 65Phen complete genome blastn 393 610 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Alcaligenaceae Castellaniella Castellaniella defragrans
318051 318051 PRJNA1182301_P_NODE_11141_length_335_cov_2.198473_g11016_i0 PRJNA1182301 11141 335 2.198473 7.36488455 Mus musculus 10090 Chordata Chordata 619 6.91e-173   NTclustered gi|21624341|dbj|AB079067.1| 10090 g11016 i0 100 21.7611940298507 335 0 100 0 1 335 2236 2570 Mus musculus cerk mRNA for ceramide kinases, complete cds blastn 7290 619 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
318052 318052 PRJNA1182301_P_NODE_11201_length_334_cov_3.409962_g11076_i0 PRJNA1182301 11201 334 3.409962 11.38927308 Achromobacter insuavis 1287735 Bacteria Bacteria 606 5.359999999999998e-169   NTclustered gi|2715113494|gb|CP150896.1| 1287735 g11076 i0 99.401 6.55688622754491 334 2 100 0 1 334 2403334 2403001 Achromobacter insuavis strain TVCGH7788 chromosome, complete genome blastn 2190 606 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Alcaligenaceae Achromobacter Achromobacter insuavis
318053 318053 PRJNA1182301_P_NODE_11221_length_334_cov_2.402299_g11096_i0 PRJNA1182301 11221 334 2.402299 8.02367866 Delftia acidovorans 80866 Bacteria Bacteria 584 2.509999999999999e-162   NTclustered gi|1943113412|gb|CP065627.1| 80866 g11096 i0 98.204 27.2694610778443 334 6 100 0 1 334 3161522 3161189 Delftia acidovorans strain FDAARGOS_939 chromosome, complete genome blastn 9108 584 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Comamonadaceae Delftia Delftia acidovorans
318054 318054 PRJNA1182301_P_NODE_11281_length_334_cov_1.007663_g11156_i0 PRJNA1182301 11281 334 1.007663 3.36559442 Castellaniella defragrans 75697 Bacteria Bacteria 617 2.48e-172   NTclustered gi|589264544|emb|HG916765.1| 1437824 g11156 i0 100 24.7275449101796 334 0 100 0 1 334 1836286 1836619 Castellaniella defragrans 65Phen complete genome blastn 8259 617 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Alcaligenaceae Castellaniella Castellaniella defragrans
318055 318055 PRJNA1182301_P_NODE_11301_length_333_cov_3.250000_g11176_i0 PRJNA1182301 11301 333 3.25 10.8225 Candidatus Brevundimonas colombiensis 3121376 Bacteria Bacteria 616 8.87e-172   NTclustered gi|2457511348|gb|CP119326.1| 3121376 g11176 i0 100 27.6156156156156 333 0 100 0 1 333 3115673 3116005 MAG: Candidatus Brevundimonas colombiensis isolate MAG_833 chromosome, complete genome blastn 9196 616 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Caulobacterales Caulobacteraceae Brevundimonas Candidatus Brevundimonas colombiensis
318056 318056 PRJNA1182301_P_NODE_11321_length_333_cov_2.369231_g11196_i0 PRJNA1182301 11321 333 2.369231 7.88953923 Mus musculus 10090 Chordata Chordata 616 8.87e-172   NTclustered gi|126012516|ref|NM_007926.2| 10090 g11196 i0 100 71.3873873873874 333 0 100 0 1 333 774 442 Mus musculus aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 (Aimp1), transcript variant 1, mRNA blastn 23772 616 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
318057 318057 PRJNA1182301_P_NODE_11341_length_333_cov_1.876923_g11216_i0 PRJNA1182301 11341 333 1.876923 6.25015359 Mus musculus 10090 Chordata Chordata 616 8.87e-172   NTclustered gi|2618679397|ref|NR_189160.1| 10090 g11216 i0 100 71.8378378378378 333 0 100 0 1 333 1524 1856 Mus musculus CD200 molecule (Cd200), transcript variant 3, non-coding RNA blastn 23922 616 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
318058 318058 PRJNA1182301_P_NODE_11381_length_332_cov_9.563707_g11256_i0 PRJNA1182301 11381 332 9.563707 31.75150724 Mus musculus 10090 Chordata Chordata 614 3.1799999999999995e-171   NTclustered gi|1907080393|ref|XM_036156409.1| 10090 g11256 i0 100 100.518072289157 332 0 100 0 1 332 613 944 PREDICTED: Mus musculus nemo like kinase (Nlk), transcript variant X4, mRNA blastn 33372 614 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
318059 318059 PRJNA1182301_P_NODE_11421_length_332_cov_2.243243_g11296_i0 PRJNA1182301 11421 332 2.243243 7.44756676 Achromobacter sp. EB05 3142974 Bacteria Bacteria 492 1.5599999999999996e-134   NTclustered gi|2735166093|gb|CP155917.1| 3142974 g11296 i0 93.884 25.7409638554217 327 18 98 2 1 326 3585613 3585938 Achromobacter sp. EB05 chromosome, complete genome blastn 8546 492 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Alcaligenaceae Achromobacter Achromobacter sp. EB05
318060 318060 PRJNA1182301_P_NODE_11461_length_332_cov_1.189189_g11336_i0 PRJNA1182301 11461 332 1.189189 3.94810748 Stenotrophomonas sp. NY11291 2939415 Bacteria Bacteria 614 3.1799999999999995e-171   NTclustered gi|2235386893|gb|CP096975.1| 2939415 g11336 i0 100 98.9457831325301 332 0 100 0 1 332 1402215 1402546 Stenotrophomonas sp. NY11291 chromosome, complete genome blastn 32850 614 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Lysobacterales Lysobacteraceae Stenotrophomonas Stenotrophomonas sp. NY11291
318061 318061 PRJNA1182301_P_NODE_11481_length_331_cov_5.503876_g11356_i0 PRJNA1182301 11481 331 5.503876 18.21782956 Achromobacter insuavis 1287735 Bacteria Bacteria 568 2.4999999999999998e-157   NTclustered gi|2715113494|gb|CP150896.1| 1287735 g11356 i0 97.583 8.97583081570997 331 8 100 0 1 331 2724489 2724819 Achromobacter insuavis strain TVCGH7788 chromosome, complete genome blastn 2971 568 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Alcaligenaceae Achromobacter Achromobacter insuavis
318062 318062 PRJNA1182301_P_NODE_11601_length_330_cov_3.206226_g11476_i0 PRJNA1182301 11601 330 3.206226 10.5805458 Mus musculus 10090 Chordata Chordata 610 4.09e-170   NTclustered gi|354789500|gb|JN954001.1| 10090 g11476 i0 100 10.5787878787879 330 0 100 0 1 330 25035 25364 Mus musculus targeted KO-first, conditional ready, lacZ-tagged mutant allele 2210016L21Rik:tm1a(KOMP)Wtsi; transgenic blastn 3491 610 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
318063 318063 PRJNA1182301_P_NODE_1161_length_723_cov_3.304615_g1045_i0 PRJNA1182301 1161 723 3.304615 23.89236645 Mus musculus 10090 Chordata Chordata 1288 0   NTclustered gi|354792962|gb|JN957463.1| 10090 g1045 i0 99.857 38.1977869986169 701 0 100 1 1 701 28332 27633 Mus musculus targeted non-conditional, lacZ-tagged mutant allele Phyhip:tm1e(EUCOMM)Hmgu; transgenic blastn 27617 1288 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
318064 318064 PRJNA1182301_P_NODE_11641_length_330_cov_2.171206_g11516_i0 PRJNA1182301 11641 330 2.171206 7.1649798 Mus musculus 10090 Chordata Chordata 610 4.09e-170   NTclustered gi|98986092|emb|CT571271.12| 10090 g11516 i0 100 93.5727272727273 330 0 100 0 1 330 3611 3282 Mouse DNA sequence from clone RP23-334M10 on chromosome 9, complete sequence blastn 30879 610 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
318065 318065 PRJNA1182301_P_NODE_11721_length_329_cov_2.867188_g11596_i0 PRJNA1182301 11721 329 2.867188 9.43304852 Mus musculus 10090 Chordata Chordata 608 1.4599999999999995e-169   NTclustered gi|1907200891|ref|XM_006511845.5| 10090 g11596 i0 100 92.9331306990882 329 0 100 0 1 329 55 383 PREDICTED: Mus musculus nudix hydrolase 16 (Nudt16), transcript variant X2, mRNA blastn 30575 608 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
318066 318066 PRJNA1182301_P_NODE_11781_length_329_cov_1.308594_g11656_i0 PRJNA1182301 11781 329 1.308594 4.30527426 Candidatus Brevundimonas colombiensis 3121376 Bacteria Bacteria 492 1.54e-134   NTclustered gi|2457511348|gb|CP119326.1| 3121376 g11656 i0 93.617 16.4072948328267 329 21 100 0 1 329 7636 7964 MAG: Candidatus Brevundimonas colombiensis isolate MAG_833 chromosome, complete genome blastn 5398 492 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Caulobacterales Caulobacteraceae Brevundimonas Candidatus Brevundimonas colombiensis
318067 318067 PRJNA1182301_P_NODE_11801_length_328_cov_4.039216_g11676_i0 PRJNA1182301 11801 328 4.039216 13.24862848 Nitrosomonas eutropha 916 Bacteria Bacteria 466 9.299999999999999e-127   NTclustered gi|114307050|gb|CP000450.1| 335283 g11676 i0 92.355 95.9451219512195 327 25 99 0 2 328 67702 67376 Nitrosomonas eutropha C91, complete genome blastn 31470 466 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Nitrosomonadales Nitrosomonadaceae Nitrosomonas Nitrosomonas eutropha
318068 318068 PRJNA1182301_P_NODE_11821_length_328_cov_2.850980_g11696_i0 PRJNA1182301 11821 328 2.85098 9.3512144 Candidatus Brevundimonas phytovorans 3121365 Bacteria Bacteria 254 7.88e-63   NTclustered gi|2457519520|gb|CP119309.1| 3121365 g11696 i0 81.627 1.28658536585366 332 38 99 11 3 328 1045344 1045658 MAG: Candidatus Brevundimonas phytovorans isolate MAG_1865 chromosome, complete genome blastn 422 254 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Caulobacterales Caulobacteraceae Brevundimonas Candidatus Brevundimonas phytovorans
318069 318069 PRJNA1182301_P_NODE_11861_length_328_cov_1.509804_g11736_i0 PRJNA1182301 11861 328 1.509804 4.95215712 Mus musculus 10090 Chordata Chordata 606 5.249999999999998e-169   NTclustered gi|23957838|gb|AF403109.2| 10090 g11736 i0 100 47.125 328 0 100 0 1 328 5509 5182 Mus musculus adenosine deaminase (Adarb1) mRNA, complete cds, alternatively spliced blastn 15457 606 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
318070 318070 PRJNA1182301_P_NODE_11881_length_328_cov_1.098039_g11756_i0 PRJNA1182301 11881 328 1.098039 3.60156792 Diaphorobacter sp. LI3 2952886 Bacteria Bacteria 568 2.4799999999999995e-157   NTclustered gi|2215519339|gb|CP094346.1| 2952886 g11756 i0 97.866 100.393292682927 328 7 100 0 1 328 163066 162739 Diaphorobacter sp. LI3 chromosome, complete genome blastn 32929 568 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Comamonadaceae Diaphorobacter Diaphorobacter sp. LI3
318071 318071 PRJNA1182301_P_NODE_11901_length_327_cov_3.488189_g11776_i0 PRJNA1182301 11901 327 3.488189 11.40637803 Mus musculus 10090 Chordata Chordata 604 1.8799999999999993e-168   NTclustered gi|2173616025|ref|NM_001399245.1| 10090 g11776 i0 100 99.1437308868502 327 0 100 0 1 327 894 1220 Mus musculus apical junction component 1 (Ajm1), transcript variant 2, mRNA blastn 32420 604 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
318072 318072 PRJNA1182301_P_NODE_11921_length_327_cov_2.688976_g11796_i0 PRJNA1182301 11921 327 2.688976 8.79295152 Mus musculus 10090 Chordata Chordata 599 8.759999999999997e-167   NTclustered gi|32996833|gb|AC021709.12| 10090 g11796 i0 99.694 95.1743119266055 327 1 100 0 1 327 168274 167948 Mus musculus chromosome 10, clone RP23-194I3, complete sequence blastn 31122 599 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
318073 318073 PRJNA1182301_P_NODE_11941_length_327_cov_2.169291_g11816_i0 PRJNA1182301 11941 327 2.169291 7.09358157 Castellaniella defragrans 75697 Bacteria Bacteria 575 1.4799999999999994e-159   NTclustered gi|589264544|emb|HG916765.1| 1437824 g11816 i0 98.466 51 326 5 99 0 1 326 1694676 1694351 Castellaniella defragrans 65Phen complete genome blastn 16677 575 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Alcaligenaceae Castellaniella Castellaniella defragrans
318074 318074 PRJNA1182301_P_NODE_11961_length_327_cov_1.795276_g11836_i0 PRJNA1182301 11961 327 1.795276 5.87055252 Mus musculus 10090 Chordata Chordata 604 1.8799999999999993e-168   NTclustered gi|254675226|ref|NM_001163567.1| 10090 g11836 i0 100 77.9724770642202 327 0 100 0 1 327 1506 1180 Mus musculus EEIG family member 2 (Eeig2), mRNA blastn 25497 604 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
318075 318075 PRJNA1182301_P_NODE_12001_length_326_cov_4.098814_g11876_i0 PRJNA1182301 12001 326 4.098814 13.36213364 Mus musculus 10090 Chordata Chordata 603 6.749999999999998e-168   NTclustered gi|59894798|ref|NM_016968.4| 10090 g11876 i0 100 14.1441717791411 326 0 100 0 1 326 1429 1754 Mus musculus oligodendrocyte transcription factor 1 (Olig1), mRNA blastn 4611 603 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
318076 318076 PRJNA1182301_P_NODE_12021_length_326_cov_2.984190_g11896_i0 PRJNA1182301 12021 326 2.98419 9.7284594 Mus musculus 10090 Chordata Chordata 603 6.749999999999998e-168   NTclustered gi|26081164|dbj|AK029120.1| 10090 g11896 i0 100 17.8803680981595 326 0 100 0 1 326 360 35 Mus musculus 10 days neonate skin cDNA, RIKEN full-length enriched library, clone:4732494H06 product:unclassifiable, full insert sequence blastn 5829 603 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
318077 318077 PRJNA1182301_P_NODE_12041_length_326_cov_2.268775_g11916_i0 PRJNA1182301 12041 326 2.268775 7.3962065 Achromobacter deleyi 1353891 Bacteria Bacteria 307 5.92e-79   NTclustered gi|1948614726|gb|CP065997.1| 1353891 g11916 i0 97.238 37.9938650306748 181 5 56 0 1 181 3174307 3174127 Achromobacter deleyi strain FDAARGOS_1050 chromosome, complete genome blastn 12386 307 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Alcaligenaceae Achromobacter Achromobacter deleyi
318078 318078 PRJNA1182301_P_NODE_12081_length_326_cov_1.217391_g11956_i0 PRJNA1182301 12081 326 1.217391 3.96869466 Mus musculus 10090 Chordata Chordata 603 6.749999999999998e-168   NTclustered gi|2814874959|ref|NM_175833.3| 10090 g11956 i0 100 102.220858895706 326 0 100 0 1 326 1231 1556 Mus musculus carnitine deficiency-associated gene expressed in ventricle 3 (Cdv3), transcript variant 2, mRNA blastn 33324 603 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
318079 318079 PRJNA1182301_P_NODE_12101_length_325_cov_4.345238_g11976_i0 PRJNA1182301 12101 325 4.345238 14.1220235 Mus musculus 10090 Chordata Chordata 601 2.4199999999999993e-167   NTclustered gi|1720403299|ref|XM_011240032.3| 10090 g11976 i0 100 100.578461538462 325 0 100 0 1 325 2801 2477 PREDICTED: Mus musculus myocyte enhancer factor 2D (Mef2d), transcript variant X5, mRNA blastn 32688 601 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
318080 318080 PRJNA1182301_P_NODE_12121_length_325_cov_2.880952_g11996_i0 PRJNA1182301 12121 325 2.880952 9.363094 Castellaniella defragrans 75697 Bacteria Bacteria 580 3.1499999999999993e-161   NTclustered gi|589264544|emb|HG916765.1| 1437824 g11996 i0 99.685 84.84 317 1 98 0 1 317 1176383 1176699 Castellaniella defragrans 65Phen complete genome blastn 27573 580 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Alcaligenaceae Castellaniella Castellaniella defragrans
318081 318081 PRJNA1182301_P_NODE_12221_length_324_cov_2.454183_g12096_i0 PRJNA1182301 12221 324 2.454183 7.95155292 Mus musculus 10090 Chordata Chordata 599 8.67e-167   NTclustered gi|939320310|ref|NM_001310677.2| 10090 g12096 i0 100 5 324 0 100 0 1 324 4418 4095 Mus musculus bone morphogenetic protein 3 (Bmp3), transcript variant 1, mRNA blastn 1620 599 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
318082 318082 PRJNA1182301_P_NODE_12241_length_324_cov_1.908367_g12116_i0 PRJNA1182301 12241 324 1.908367 6.18310908 Mus musculus 10090 Chordata Chordata 592 1.4499999999999999e-164   NTclustered gi|354799629|gb|JN964130.1| 10090 g12116 i0 99.691 26.820987654321 324 0 100 1 1 324 23745 23423 Mus musculus targeted non-conditional, lacZ-tagged mutant allele Txnl4a:tm1e(EUCOMM)Hmgu; transgenic blastn 8690 592 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
318083 318083 PRJNA1182301_P_NODE_12261_length_324_cov_1.637450_g12136_i0 PRJNA1182301 12261 324 1.63745 5.305338 Mus musculus 10090 Chordata Chordata 599 8.67e-167   NTclustered gi|187956963|gb|BC157940.1| 10090 g12136 i0 100 32.0925925925926 324 0 100 0 1 324 5401 5078 Mus musculus phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1, mRNA (cDNA clone MGC:189933 IMAGE:9088120), complete cds blastn 10398 599 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
318084 318084 PRJNA1182301_P_NODE_12301_length_323_cov_3.564000_g12176_i0 PRJNA1182301 12301 323 3.564 11.51172 Achromobacter insuavis 1287735 Bacteria Bacteria 592 1.4499999999999999e-164   NTclustered gi|2715113494|gb|CP150896.1| 1287735 g12176 i0 99.69 119.823529411765 323 1 100 0 1 323 2083837 2083515 Achromobacter insuavis strain TVCGH7788 chromosome, complete genome blastn 38703 592 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Alcaligenaceae Achromobacter Achromobacter insuavis
318085 318085 PRJNA1182301_P_NODE_12321_length_323_cov_2.704000_g12196_i0 PRJNA1182301 12321 323 2.704 8.73392 Pseudomonas sp. SD17-1 2976883 Bacteria Bacteria 592 1.4499999999999999e-164   NTclustered gi|2457373195|gb|CP104044.1| 2976883 g12196 i0 99.69 1 323 1 100 0 1 323 2482801 2483123 Pseudomonas sp. SD17-1 chromosome, complete genome blastn 323 592 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Pseudomonadales Pseudomonadaceae Pseudomonas Pseudomonas sp. SD17-1
318086 318086 PRJNA1182301_P_NODE_12361_length_323_cov_1.644000_g12236_i0 PRJNA1182301 12361 323 1.644 5.31012 Serratia marcescens 615 Bacteria Bacteria 492 1.5099999999999996e-134   NTclustered gi|1048493668|emb|LT575490.1| 615 g12236 i0 94.118 4.0061919504644 323 19 100 0 1 323 3222981 3223303 Serratia marcescens isolate PWN146_assembly genome assembly, chromosome: Chromosome blastn 1294 492 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Yersiniaceae Serratia Serratia marcescens
318087 318087 PRJNA1182301_P_NODE_12421_length_322_cov_2.919679_g12296_i0 PRJNA1182301 12421 322 2.919679 9.40136638 Mus musculus 10090 Chordata Chordata 595 1.1099999999999995e-165   NTclustered gi|354792185|gb|JN956686.1| 10090 g12296 i0 100 42.5621118012422 322 0 100 0 1 322 36984 37305 Mus musculus targeted non-conditional, lacZ-tagged mutant allele Rcc2:tm1e(EUCOMM)Wtsi; transgenic blastn 13705 595 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
318088 318088 PRJNA1182301_P_NODE_12441_length_322_cov_2.377510_g12316_i0 PRJNA1182301 12441 322 2.37751 7.6555822 Candidatus Brevundimonas colombiensis 3121376 Bacteria Bacteria 499 8.979999999999999e-137   NTclustered gi|2457511348|gb|CP119326.1| 3121376 g12316 i0 94.704 27.7577639751553 321 17 99 0 1 321 1320922 1320602 MAG: Candidatus Brevundimonas colombiensis isolate MAG_833 chromosome, complete genome blastn 8938 499 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Caulobacterales Caulobacteraceae Brevundimonas Candidatus Brevundimonas colombiensis
318089 318089 PRJNA1182301_P_NODE_12481_length_322_cov_1.658635_g12356_i0 PRJNA1182301 12481 322 1.658635 5.3408047 Methylorubrum sp. B1-46 2897334 Bacteria Bacteria 534 2.46e-147   NTclustered gi|2161694424|gb|CP088247.1| 2897334 g12356 i0 96.584 15.944099378882 322 11 100 0 1 322 2439981 2439660 Methylorubrum sp. B1-46 chromosome, complete genome blastn 5134 534 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Methylobacteriaceae Methylorubrum Methylorubrum sp. B1-46
318090 318090 PRJNA1182301_P_NODE_12501_length_322_cov_1.204819_g12376_i0 PRJNA1182301 12501 322 1.204819 3.87951718 Rhodotorula glutinis 5535 Fungi Fungi 523 5.329999999999999e-144   NTclustered gi|225134685|gb|FJ345357.1| 5535 g12376 i0 95.963 106.329192546584 322 13 100 0 1 322 2505 2184 Rhodotorula glutinis strain ATCC 16726 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 34238 523 1 Eukaryota Opisthokonta Fungi Basidiomycota Microbotryomycetes Sporidiobolales Sporidiobolaceae Rhodotorula Rhodotorula glutinis
318091 318091 PRJNA1182301_P_NODE_12521_length_321_cov_4.104839_g12396_i0 PRJNA1182301 12521 321 4.104839 13.17653319 Achromobacter insuavis 1287735 Bacteria Bacteria 582 8.639999999999997e-162   NTclustered gi|2715113494|gb|CP150896.1| 1287735 g12396 i0 99.377 23.9688473520249 321 2 100 0 1 321 3944652 3944972 Achromobacter insuavis strain TVCGH7788 chromosome, complete genome blastn 7694 582 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Alcaligenaceae Achromobacter Achromobacter insuavis
318092 318092 PRJNA1182301_P_NODE_12601_length_321_cov_1.693548_g12476_i0 PRJNA1182301 12601 321 1.693548 5.43628908 Mus musculus 10090 Chordata Chordata 593 3.9899999999999986e-165   NTclustered gi|166235121|ref|NM_198160.2| 10090 g12476 i0 100 99.1775700934579 321 0 100 0 1 321 1322 1002 Mus musculus SWI/SNF related BAF chromatin remodeling complex subunit C2 (Smarcc2), transcript variant 3, mRNA blastn 31836 593 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
318093 318093 PRJNA1182301_P_NODE_1261_length_704_cov_3.610143_g1144_i0 PRJNA1182301 1261 704 3.610143 25.41540672 Achromobacter insuavis 1287735 Bacteria Bacteria 1199 0   NTclustered gi|2715113494|gb|CP150896.1| 1287735 g1144 i0 97.443 48.4588068181818 704 17 100 1 1 704 158542 157840 Achromobacter insuavis strain TVCGH7788 chromosome, complete genome blastn 34115 1199 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Alcaligenaceae Achromobacter Achromobacter insuavis
318094 318094 PRJNA1182301_P_NODE_12621_length_321_cov_1.205645_g12496_i0 PRJNA1182301 12621 321 1.205645 3.87012045 Achromobacter deleyi 1353891 Bacteria Bacteria 571 1.8699999999999993e-158   NTclustered gi|1948614726|gb|CP065997.1| 1353891 g12496 i0 98.754 96.1931464174455 321 4 100 0 1 321 2278403 2278723 Achromobacter deleyi strain FDAARGOS_1050 chromosome, complete genome blastn 30878 571 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Alcaligenaceae Achromobacter Achromobacter deleyi
318095 318095 PRJNA1182301_P_NODE_12641_length_320_cov_3.854251_g12516_i0 PRJNA1182301 12641 320 3.854251 12.3336032 Castellaniella defragrans 75697 Bacteria Bacteria 569 6.699999999999998e-158   NTclustered gi|589264544|emb|HG916765.1| 1437824 g12516 i0 98.75 22.7875 320 4 100 0 1 320 1562716 1562397 Castellaniella defragrans 65Phen complete genome blastn 7292 569 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Alcaligenaceae Castellaniella Castellaniella defragrans
318096 318096 PRJNA1182301_P_NODE_12721_length_320_cov_1.720648_g12596_i0 PRJNA1182301 12721 320 1.720648 5.5060736 Achromobacter insuavis 1287735 Bacteria Bacteria 569 6.699999999999998e-158   NTclustered gi|2715113494|gb|CP150896.1| 1287735 g12596 i0 98.75 62.48125 320 4 100 0 1 320 864650 864331 Achromobacter insuavis strain TVCGH7788 chromosome, complete genome blastn 19994 569 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Alcaligenaceae Achromobacter Achromobacter insuavis
318097 318097 PRJNA1182301_P_NODE_12741_length_320_cov_1.145749_g12616_i0 PRJNA1182301 12741 320 1.145749 3.6663968 Mus musculus 10090 Chordata Chordata 592 1.4299999999999996e-164   NTclustered gi|22137696|gb|BC029192.1| 10090 g12616 i0 100 70.115625 320 0 100 0 1 320 680 361 Mus musculus RIKEN cDNA 2410022L05 gene, mRNA (cDNA clone MGC:35741 IMAGE:2647299), complete cds blastn 22437 592 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
318098 318098 PRJNA1182301_P_NODE_12781_length_319_cov_2.756098_g12656_i0 PRJNA1182301 12781 319 2.756098 8.79195262 Achromobacter insuavis 1287735 Bacteria Bacteria 568 2.3999999999999993e-157   NTclustered gi|2715113494|gb|CP150896.1| 1287735 g12656 i0 98.746 70.6708463949843 319 4 100 0 1 319 4991714 4992032 Achromobacter insuavis strain TVCGH7788 chromosome, complete genome blastn 22544 568 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Alcaligenaceae Achromobacter Achromobacter insuavis
318099 318099 PRJNA1182301_P_NODE_12801_length_319_cov_2.292683_g12676_i0 PRJNA1182301 12801 319 2.292683 7.31365877 Mus musculus 10090 Chordata Chordata 590 5.1299999999999986e-164   NTclustered gi|350529307|ref|NM_025441.3| 10090 g12676 i0 100 96.7774294670846 319 0 100 0 1 319 2619 2301 Mus musculus nuclear export mediator factor (Nemf), mRNA blastn 30872 590 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
318100 318100 PRJNA1182301_P_NODE_12821_length_319_cov_1.873984_g12696_i0 PRJNA1182301 12821 319 1.873984 5.97800896 Hydrogenophaga sp. NH-16 2184519 Bacteria Bacteria 189 2.1799999999999998e-43   NTclustered gi|1551376812|gb|CP029344.1| 2184519 g12696 i0 85.027 2.89028213166144 187 26 58 2 42 227 1055761 1055946 Hydrogenophaga sp. NH-16 chromosome blastn 922 189 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Comamonadaceae Hydrogenophaga Hydrogenophaga sp. NH-16
318101 318101 PRJNA1182301_P_NODE_12841_length_319_cov_1.491870_g12716_i0 PRJNA1182301 12841 319 1.49187 4.7590653 Mus musculus 10090 Chordata Chordata 590 5.1299999999999986e-164   NTclustered gi|1907194746|ref|XM_006509961.4| 10090 g12716 i0 100 93 319 0 100 0 1 319 3771 4089 PREDICTED: Mus musculus hypoxia up-regulated 1 (Hyou1), transcript variant X3, mRNA blastn 29667 590 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
318102 318102 PRJNA1182301_P_NODE_12901_length_318_cov_2.387755_g12776_i0 PRJNA1182301 12901 318 2.387755 7.5930609 Pseudomonas putida 303 Bacteria Bacteria 588 1.84e-163   NTclustered gi|1111513183|dbj|AP015029.1| 303 g12776 i0 100 16.5534591194969 318 0 100 0 1 318 2676359 2676042 Pseudomonas putida DNA, complete genome, strain: KF715 blastn 5264 588 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Pseudomonadales Pseudomonadaceae Pseudomonas Pseudomonas putida
318103 318103 PRJNA1182301_P_NODE_12941_length_318_cov_1.257143_g12816_i0 PRJNA1182301 12941 318 1.257143 3.99771474 Castellaniella defragrans 75697 Bacteria Bacteria 488 1.9199999999999997e-133   NTclustered gi|589264544|emb|HG916765.1| 1437824 g12816 i0 94.34 98.2798742138365 318 18 100 0 1 318 955149 955466 Castellaniella defragrans 65Phen complete genome blastn 31253 488 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Alcaligenaceae Castellaniella Castellaniella defragrans
318104 318104 PRJNA1182301_P_NODE_12961_length_317_cov_3.360656_g12836_i0 PRJNA1182301 12961 317 3.360656 10.65327952 Mus musculus 10090 Chordata Chordata 586 6.579999999999998e-163   NTclustered gi|354786240|gb|JN950741.1| 10090 g12836 i0 100 21.6593059936909 317 0 100 0 1 317 22555 22239 Mus musculus targeted deletion, lacZ-tagged mutant allele C030030A07Rik:tm1(KOMP)Wtsi; transgenic blastn 6866 586 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
318105 318105 PRJNA1182301_P_NODE_12981_length_317_cov_2.467213_g12856_i0 PRJNA1182301 12981 317 2.467213 7.82106521 Achromobacter insuavis 1287735 Bacteria Bacteria 542 1.45e-149   NTclustered gi|2715113494|gb|CP150896.1| 1287735 g12856 i0 97.484 42.2996845425868 318 7 100 1 1 317 5908421 5908738 Achromobacter insuavis strain TVCGH7788 chromosome, complete genome blastn 13409 542 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Alcaligenaceae Achromobacter Achromobacter insuavis
318106 318106 PRJNA1182301_P_NODE_13001_length_317_cov_1.987705_g12876_i0 PRJNA1182301 13001 317 1.987705 6.30102485 Achromobacter insuavis 1287735 Bacteria Bacteria 558 1.44e-154   NTclustered gi|2715113494|gb|CP150896.1| 1287735 g12876 i0 98.423 99.8422712933754 317 5 100 0 1 317 5444394 5444078 Achromobacter insuavis strain TVCGH7788 chromosome, complete genome blastn 31650 558 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Alcaligenaceae Achromobacter Achromobacter insuavis
318107 318107 PRJNA1182301_P_NODE_13021_length_317_cov_1.622951_g12896_i0 PRJNA1182301 13021 317 1.622951 5.14475467 Rhodopseudomonas boonkerdii 475937 Bacteria Bacteria 326 1.58e-84   NTclustered gi|2164970004|gb|CP036537.1| 475937 g12896 i0 85.489 1.9589905362776 317 40 99 6 4 317 2254598 2254911 Rhodopseudomonas boonkerdii strain NS23 chromosome, complete genome blastn 621 326 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Rhodopseudomonas Rhodopseudomonas boonkerdii
318108 318108 PRJNA1182301_P_NODE_13061_length_316_cov_3.172840_g12936_i0 PRJNA1182301 13061 316 3.17284 10.0261744 Mus musculus 10090 Chordata Chordata 584 2.359999999999999e-162   NTclustered gi|1907173760|ref|XM_030255645.2| 10090 g12936 i0 100 23.503164556962 316 0 100 0 1 316 2648 2963 PREDICTED: Mus musculus family with sequence similarity 234, member B (Fam234b), transcript variant X2, mRNA blastn 7427 584 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
318109 318109 PRJNA1182301_P_NODE_13081_length_316_cov_2.432099_g12956_i0 PRJNA1182301 13081 316 2.432099 7.68543284 Mus musculus 10090 Chordata Chordata 582 8.489999999999998e-162   NTclustered gi|1039735683|ref|XM_017314259.1| 10090 g12956 i0 100 31.6867088607595 315 0 99 0 2 316 2382 2068 PREDICTED: Mus musculus gamma-aminobutyric acid type A receptor subunit alpha 1 (Gabra1), transcript variant X2, mRNA blastn 10013 582 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
318110 318110 PRJNA1182301_P_NODE_13101_length_316_cov_1.995885_g12976_i0 PRJNA1182301 13101 316 1.995885 6.3069966 Achromobacter insuavis 1287735 Bacteria Bacteria 551 2.389999999999999e-152   NTclustered gi|2715113494|gb|CP150896.1| 1287735 g12976 i0 98.101 71.1170886075949 316 6 100 0 1 316 4533493 4533178 Achromobacter insuavis strain TVCGH7788 chromosome, complete genome blastn 22473 551 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Alcaligenaceae Achromobacter Achromobacter insuavis
318111 318111 PRJNA1182301_P_NODE_13121_length_316_cov_1.679012_g12996_i0 PRJNA1182301 13121 316 1.679012 5.30567792 Mus musculus 10090 Chordata Chordata 584 2.359999999999999e-162   NTclustered gi|28374371|gb|BC046323.1| 10090 g12996 i0 100 37.4873417721519 316 0 100 0 1 316 2453 2138 Mus musculus serine palmitoyltransferase, long chain base subunit 1, mRNA (cDNA clone MGC:54758 IMAGE:6391985), complete cds blastn 11846 584 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
318112 318112 PRJNA1182301_P_NODE_13161_length_315_cov_4.851240_g13036_i0 PRJNA1182301 13161 315 4.85124 15.281406 Achromobacter deleyi 1353891 Bacteria Bacteria 582 8.459999999999998e-162   NTclustered gi|1948614726|gb|CP065997.1| 1353891 g13036 i0 100 97.3428571428571 315 0 100 0 1 315 3867368 3867054 Achromobacter deleyi strain FDAARGOS_1050 chromosome, complete genome blastn 30663 582 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Alcaligenaceae Achromobacter Achromobacter deleyi
318113 318113 PRJNA1182301_P_NODE_1321_length_691_cov_3.336570_g1204_i0 PRJNA1182301 1321 691 3.33657 23.0556987 Achromobacter insuavis 1287735 Bacteria Bacteria 741 0   NTclustered gi|2715113494|gb|CP150896.1| 1287735 g1204 i0 99.752 30.6801736613603 404 1 99 0 1 404 2020222 2019819 Achromobacter insuavis strain TVCGH7788 chromosome, complete genome blastn 21200 741 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Alcaligenaceae Achromobacter Achromobacter insuavis
318114 318114 PRJNA1182301_P_NODE_13301_length_314_cov_2.419087_g13176_i0 PRJNA1182301 13301 314 2.419087 7.59593318 Achromobacter deleyi 1353891 Bacteria Bacteria 490 5.249999999999998e-134   NTclustered gi|1948614726|gb|CP065997.1| 1353891 g13176 i0 94.888 2.67515923566879 313 16 99 0 1 313 2714743 2715055 Achromobacter deleyi strain FDAARGOS_1050 chromosome, complete genome blastn 840 490 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Alcaligenaceae Achromobacter Achromobacter deleyi
318115 318115 PRJNA1182301_P_NODE_13361_length_314_cov_1.278008_g13236_i0 PRJNA1182301 13361 314 1.278008 4.01294512 Castellaniella defragrans 75697 Bacteria Bacteria 580 3.0299999999999992e-161   NTclustered gi|589264544|emb|HG916765.1| 1437824 g13236 i0 100 54.0063694267516 314 0 100 0 1 314 3767174 3766861 Castellaniella defragrans 65Phen complete genome blastn 16958 580 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Alcaligenaceae Castellaniella Castellaniella defragrans
318116 318116 PRJNA1182301_P_NODE_13401_length_313_cov_3.333333_g13276_i0 PRJNA1182301 13401 313 3.333333 10.43333229 Castellaniella defragrans 75697 Bacteria Bacteria 573 5.049999999999998e-159   NTclustered gi|589264544|emb|HG916765.1| 1437824 g13276 i0 99.681 3.53035143769968 313 1 100 0 1 313 2904311 2903999 Castellaniella defragrans 65Phen complete genome blastn 1105 573 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Alcaligenaceae Castellaniella Castellaniella defragrans

Next page

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;