RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1182301" and tax_phylum = "Candidatus Hydrogenedentota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Hydrogenedentota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1182301 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30420136 30420136 PRJNA1182301_P_NODE_68693_length_202_cov_4.325581_g68568_i0 PRJNA1182301 68693 202 4.325581 8.73767362 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 104 1.3399999999999999e-24   NR HOJ32056.1 2030809 g68568 i0 71.2 2.94059405940594 66 19 98 0 3 200 356 421 HOJ32056.1 L-rhamnose isomerase [Candidatus Hydrogenedentota bacterium] diamond 594 104 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
31177788 31177788 PRJNA1182301_P_NODE_48535_length_251_cov_1.578652_g48410_i0 PRJNA1182301 48535 251 1.578652 3.96241652 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 70.5 6.85e-12   NR HRK35978.1 2030809 g48410 i0 48.2 0.99203187250996006 83 35 96.8 3 8 250 95 171 HRK35978.1 hypothetical protein [Candidatus Hydrogenedentota bacterium] diamond 249 70.5 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;