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contig_metadata

16 rows where bioproject = "PRJNA1182301" and tax_phylum = "Armatimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 16 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1182301 · 16 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4145600 4145600 PRJNA1182301_P_NODE_40684_length_261_cov_1.638298_g40559_i0 PRJNA1182301 40684 261 1.638298 4.27595778 Armatimonadota bacterium 2033014 Bacteria Bacteria 121 7.38e-30   NR NLC57851.1 2033014 g40559 i0 66.3 0.988505747126437 86 29 98.9 0 2 259 485 570 NLC57851.1 hypothetical protein [Armatimonadota bacterium] diamond 258 121 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
13072563 13072563 PRJNA1182301_P_NODE_53571_length_248_cov_0.880000_g53446_i0 PRJNA1182301 53571 248 0.88 2.1824 Chthonomonadaceae bacterium 2739509 Bacteria Bacteria 111 5.279999999999999e-28   NR MCW3099777.1 2739509 g53446 i0 59.8 1.98387096774194 82 33 99.2 0 247 2 99 180 MCW3099777.1 metal dependent phosphohydrolase [Chthonomonadaceae bacterium] diamond 492 111 1 Bacteria   Bacillati Armatimonadota Chthonomonadia Chthonomonadales Chthonomonadaceae   Chthonomonadaceae bacterium
15621241 15621241 PRJNA1182301_P_NODE_30733_length_274_cov_1.532338_g30608_i0 PRJNA1182301 30733 274 1.532338 4.19860612 Armatimonadota bacterium 2033014 Bacteria Bacteria 80.9 1.96e-15   NR HHX42331.1 2033014 g30608 i0 47.5 1.08394160583942 99 41 96.4 3 7 270 90 188 HHX42331.1 transposase [Armatimonadota bacterium] diamond 297 80.9 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
28051340 28051340 PRJNA1182301_P_NODE_42685_length_258_cov_2.432432_g42560_i0 PRJNA1182301 42685 258 2.432432 6.27567456 Armatimonadota bacterium 2033014 Bacteria Bacteria 100 1.8e-23   NR HTE18293.1 2033014 g42560 i0 70 1.67441860465116 70 20 81.4 1 3 212 183 251 HTE18293.1 MBL fold metallo-hydrolase [Armatimonadota bacterium] diamond 432 100 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
28588310 28588310 PRJNA1182301_P_NODE_43847_length_257_cov_1.673913_g43722_i0 PRJNA1182301 43847 257 1.673913 4.30195641 Armatimonadota bacterium 2033014 Bacteria Bacteria 52.4 1.79e-5   NR HEY3281767.1 2033014 g43722 i0 35.6 0.852140077821012 73 46 84 1 222 7 96 168 HEY3281767.1 carboxypeptidase regulatory-like domain-containing protein [Armatimonadota bacterium] diamond 219 52.4 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
28777462 28777462 PRJNA1182301_P_NODE_46587_length_253_cov_2.261111_g46462_i0 PRJNA1182301 46587 253 2.261111 5.72061083 Armatimonadota bacterium 2033014 Bacteria Bacteria 125 1.06e-33   NR MFN3650927.1 2033014 g46462 i0 69 0.99604743083004 84 26 99.6 0 252 1 26 109 MFN3650927.1 Crp/Fnr family transcriptional regulator [Armatimonadota bacterium] diamond 252 125 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
28796477 28796477 PRJNA1182301_P_NODE_27687_length_278_cov_1.878049_g27562_i0 PRJNA1182301 27687 278 1.878049 5.22097622 Bacteria 2 Bacteria Bacteria 100 1.55e-23   NR NLI01070.1 2282151 g27562 i0 87.3 4.89928057553957 63 8 68 0 219 31 3 65 NLI01070.1 DUF1559 domain-containing protein [Chthonomonadales bacterium] diamond 1362 101 0.99009900990099 Bacteria   Bacillati Armatimonadota Chthonomonadia Chthonomonadales     Chthonomonadales bacterium
28967142 28967142 PRJNA1182301_P_NODE_22108_length_286_cov_1.417840_g21983_i0 PRJNA1182301 22108 286 1.41784 4.0550224 Fimbriimonas ginsengisoli 1005039 Bacteria Bacteria 125 1.23e-33   NR MBI3722288.1 1005039 g21983 i0 66 2.95804195804196 94 32 98.6 0 284 3 61 154 MBI3722288.1 hypothetical protein [Fimbriimonas ginsengisoli] diamond 846 125 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas ginsengisoli
29219748 29219748 PRJNA1182301_P_NODE_45589_length_254_cov_3.751381_g45464_i0 PRJNA1182301 45589 254 3.751381 9.52850774 Armatimonadota bacterium 2033014 Bacteria Bacteria 134 1.3e-35   NR MBC8135387.1 2033014 g45464 i0 84.5 0.992125984251969 84 13 99.2 0 253 2 126 209 MBC8135387.1 HEAT repeat domain-containing protein [Armatimonadota bacterium] diamond 252 134 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
29535329 29535329 PRJNA1182301_P_NODE_46010_length_254_cov_1.701657_g45885_i0 PRJNA1182301 46010 254 1.701657 4.32220878 Chthonomonadaceae bacterium 2739509 Bacteria Bacteria 110 4.63e-26   NR HLK60049.1 2739509 g45885 i0 64.3 3.96850393700787 84 30 99.2 0 1 252 33 116 HLK60049.1 tetratricopeptide repeat protein [Chthonomonadaceae bacterium] diamond 1008 110 1 Bacteria   Bacillati Armatimonadota Chthonomonadia Chthonomonadales Chthonomonadaceae   Chthonomonadaceae bacterium
30439124 30439124 PRJNA1182301_P_NODE_57473_length_245_cov_0.895349_g57348_i0 PRJNA1182301 57473 245 0.895349 2.19360505 Bacteria 2 Bacteria Bacteria 65.1 4.64e-10   NR MDQ3814043.1 2033014 g57348 i0 47 1.56734693877551 66 35 80.8 0 48 245 10 75 MDQ3814043.1 GntR family transcriptional regulator [Armatimonadota bacterium] diamond 384 65.1 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
31336072 31336072 PRJNA1182301_P_NODE_61416_length_242_cov_1.591716_g61291_i0 PRJNA1182301 61416 242 1.591716 3.85195272 Armatimonadota bacterium 2033014 Bacteria Bacteria 130 7.04e-33   NR MBI3910514.1 2033014 g61291 i0 81.3 2.97520661157025 80 15 99.2 0 240 1 1376 1455 MBI3910514.1 FtsX-like permease family protein [Armatimonadota bacterium] diamond 720 130 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
31462927 31462927 PRJNA1182301_P_NODE_59676_length_243_cov_2.264706_g59551_i0 PRJNA1182301 59676 243 2.264706 5.50323558 Armatimonadota bacterium 2033014 Bacteria Bacteria 75.5 1.73e-14   NR HEY3281305.1 2033014 g59551 i0 55.4 1.82716049382716 74 33 91.4 0 22 243 1 74 HEY3281305.1 hypothetical protein [Armatimonadota bacterium] diamond 444 75.5 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
31557815 31557815 PRJNA1182301_P_NODE_26656_length_280_cov_1.096618_g26531_i0 PRJNA1182301 26656 280 1.096618 3.0705304 Armatimonadota bacterium 2033014 Bacteria Bacteria 45.4 0.0038   NR MBW3624845.1 2033014 g26531 i0 65.6 0.342857142857143 32 10 34.3 1 3 98 54 84 MBW3624845.1 NHL repeat-containing protein [Armatimonadota bacterium] diamond 96 45.4 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
32114673 32114673 PRJNA1182301_P_NODE_58998_length_244_cov_0.900585_g58873_i0 PRJNA1182301 58998 244 0.900585 2.1974274 Bacteria 2 Bacteria Bacteria 99 6.1000000000000005e-22   NR MDQ3814842.1 2033014 g58873 i0 66.2 2.37295081967213 65 22 79.9 0 50 244 122 186 MDQ3814842.1 CRTAC1 family protein [Armatimonadota bacterium] diamond 579 99 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
32853287 32853287 PRJNA1182301_P_NODE_46220_length_254_cov_1.447514_g46095_i0 PRJNA1182301 46220 254 1.447514 3.67668556 Armatimonadota bacterium 2033014 Bacteria Bacteria 138 5.899999999999999e-36   NR MBI3910412.1 2033014 g46095 i0 75 0.992125984251969 84 21 99.2 0 3 254 316 399 MBI3910412.1 GAF domain-containing protein [Armatimonadota bacterium] diamond 252 138 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;