RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA1182301" and tax_kingdom = "Orthornavirae"

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analysis 2

tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 4 ✖

bioproject 1

  • PRJNA1182301 · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
18170450 18170450 PRJNA1182301_P_NODE_44475_length_256_cov_1.683060_g44350_i0 PRJNA1182301 44475 256 1.68306 4.3086336 Iflavirus sp. 1916690 Viruses Viruses 473 4.189999999999999e-129   NTclustered gi|2895513771|tpg|BK068506.1| 1916690 g44350 i0 100 2 256 0 100 0 1 256 1846 1591 TPA_asm: Iflavirus sp. isolate WUR35 polyprotein gene, complete cds blastn 512 473 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Iflaviridae Iflavirus Iflavirus sp.
23993594 23993594 PRJNA1182301_P_NODE_27519_length_278_cov_2.253659_g27394_i0 PRJNA1182301 27519 278 2.253659 6.26517202 root 1 Root_unresolved Root_unresolved 514 2.7199999999999996e-141   NTclustered gi|2649349941|gb|OR995580.1| 11276 g27394 i0 100 100.028776978417 278 0 100 0 1 278 3331 3608 Mutant Vesicular stomatitis virus clone recombinant VSVdM51-RBD, complete genome blastn 27808 514 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Rhabdoviridae Vesiculovirus Vesicular stomatitis virus
29093467 29093467 PRJNA1182301_P_NODE_2268_length_559_cov_4.604938_g2144_i0 PRJNA1182301 2268 559 4.604938 25.74160342 Orthomarburgvirus marburgense 3052505 Viruses Viruses 377 2.82e-117   NR AAR85459.1 3052505 g2144 i0 100 0.998211091234347 186 0 99.8 0 558 1 1057 1242 AAR85459.1 L protein [Orthomarburgvirus marburgense] diamond 558 377 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Filoviridae Orthomarburgvirus Orthomarburgvirus marburgense
29851212 29851212 PRJNA1182301_P_NODE_62571_length_241_cov_1.833333_g62446_i0 PRJNA1182301 62571 241 1.833333 4.41833253 Aspergillus flavus virga-like virus 1 3030773 Viruses Viruses 63.2 2.21e-9   NR BED98336.1 3030773 g62446 i0 45.5 0.95850622406639 77 40 93.4 1 15 239 343 419 BED98336.1 MAG: hypothetical protein [Aspergillus flavus virga-like virus 1] diamond 231 63.2 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae   Aspergillus flavus virga-like virus 1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;