contig_metadata
7 rows where bioproject = "PRJNA1148190" and tax_phylum = "Tubulinea"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2844493 | 2844493 | PRJNA1148190_P_NODE_292263_length_323_cov_1.240000_g281090_i0 | PRJNA1148190 | 292263 | 323 | 1.24 | 4.0052 | Vermamoeba vermiformis | 5778 | Tubulinea | other_Eukaryota | 409 | 1.56e-109 | NTclustered | gi|62910949|gb|AY925001.1| | 5778 | g281090 | i0 | 95.669 | 0.91640866873065 | 254 | 11 | 79 | 0 | 1 | 254 | 254 | 1 | Hartmannella vermiformis Rpl7A mRNA, partial cds | blastn | 296 | 409 | 1 | Eukaryota | Amoebozoa | Tubulinea | Echinamoebida | Vermamoeba | Vermamoeba vermiformis | ||||
| 6677965 | 6677965 | PRJNA1148190_P_NODE_778146_length_241_cov_0.916667_g766973_i0 | PRJNA1148190 | 778146 | 241 | 0.916667 | 2.20916747 | Vermamoeba vermiformis | 5778 | Tubulinea | other_Eukaryota | 368 | 1.9e-97 | NTclustered | gi|421976335|gb|JQ519484.1| | 5778 | g766973 | i0 | 94.191 | 58.4439834024896 | 241 | 14 | 100 | 0 | 1 | 241 | 468 | 228 | Vermamoeba vermiformis clone JGHverm1 beta-tubulin gene, partial cds | blastn | 14085 | 368 | 1 | Eukaryota | Amoebozoa | Tubulinea | Echinamoebida | Vermamoeba | Vermamoeba vermiformis | ||||
| 10504098 | 10504098 | PRJNA1148190_P_NODE_795049_length_237_cov_2.542683_g783876_i0 | PRJNA1148190 | 795049 | 237 | 2.542683 | 6.02615871 | Vermamoeba vermiformis | 5778 | Tubulinea | other_Eukaryota | 399 | 6.589999999999999e-107 | NTclustered | gi|423292048|gb|JQ519470.1| | 5778 | g783876 | i0 | 97.046 | 91.2784810126582 | 237 | 7 | 100 | 0 | 1 | 237 | 651 | 415 | Vermamoeba vermiformis clone JG10.132_b5 alpha tubulin gene, partial cds | blastn | 21633 | 399 | 1 | Eukaryota | Amoebozoa | Tubulinea | Echinamoebida | Vermamoeba | Vermamoeba vermiformis | ||||
| 20162373 | 20162373 | PRJNA1148190_P_NODE_67436_length_684_cov_1.355155_g56372_i0 | PRJNA1148190 | 67436 | 684 | 1.355155 | 9.2692602 | root | 1 | Root_unresolved | Root_unresolved | 246 | 8.96e-74 | NR | AKT93973.1 | 5778 | g56372 | i0 | 56.5 | 2.81578947368421 | 216 | 87 | 93.9 | 3 | 8 | 649 | 47 | 257 | AKT93973.1 NADH dehydrogenase subunit 11 [Vermamoeba vermiformis] | diamond | 1926 | 246 | 1 | Eukaryota | Amoebozoa | Tubulinea | Echinamoebida | Vermamoeba | Vermamoeba vermiformis | ||||
| 23250938 | 23250938 | PRJNA1148190_P_NODE_663699_length_247_cov_0.885057_g652526_i0 | PRJNA1148190 | 663699 | 247 | 0.885057 | 2.18609079 | Vermamoeba vermiformis | 5778 | Tubulinea | other_Eukaryota | 412 | 8.89e-111 | NTclustered | gi|62910949|gb|AY925001.1| | 5778 | g652526 | i0 | 96.761 | 2.27935222672065 | 247 | 8 | 100 | 0 | 1 | 247 | 498 | 744 | Hartmannella vermiformis Rpl7A mRNA, partial cds | blastn | 563 | 412 | 1 | Eukaryota | Amoebozoa | Tubulinea | Echinamoebida | Vermamoeba | Vermamoeba vermiformis | ||||
| 29218863 | 29218863 | PRJNA1148190_P_NODE_498869_length_267_cov_1.190722_g487696_i0 | PRJNA1148190 | 498869 | 267 | 1.190722 | 3.17922774 | Vermamoeba vermiformis | 5778 | Tubulinea | other_Eukaryota | 111 | 6.61e-27 | NR | AKT93936.1 | 5778 | g487696 | i0 | 62.5 | 2.97752808988764 | 88 | 33 | 98.9 | 0 | 3 | 266 | 161 | 248 | AKT93936.1 translation elongation factor Tu [Vermamoeba vermiformis] | diamond | 795 | 111 | 1 | Eukaryota | Amoebozoa | Tubulinea | Echinamoebida | Vermamoeba | Vermamoeba vermiformis | ||||
| 30513744 | 30513744 | PRJNA1148190_P_NODE_583013_length_251_cov_1.207865_g571840_i0 | PRJNA1148190 | 583013 | 251 | 1.207865 | 3.03174115 | Amoeba proteus | 5775 | Tubulinea | other_Eukaryota | 77 | 3.44e-14 | NR | AKN09695.1 | 5775 | g571840 | i0 | 48.8 | 0.9800796812749 | 82 | 27 | 96.8 | 2 | 2 | 244 | 152 | 219 | AKN09695.1 Mmm1, partial [Amoeba proteus] | diamond | 246 | 77 | 1 | Eukaryota | Amoebozoa | Tubulinea | Elardia | Euamoebida | Amoebidae | Amoeba | Amoeba proteus |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;