RNAquarium Metadata Server
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contig_metadata

10 rows where bioproject = "PRJNA1148190" and tax_phylum = "Pisuviricota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Pisuviricota · 10 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1148190 · 10 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9226684 9226684 PRJNA1148190_P_NODE_664288_length_247_cov_0.885057_g653115_i0 PRJNA1148190 664288 247 0.885057 2.18609079 Betacoronavirus pandemicum 3418604 Viruses Viruses 71.3 6.16e-8   NTclustered gi|2155043488|emb|OV016109.1| 2697049 g653115 i0 92.157 41.8016194331984 51 2 20 2 198 247 30013 30062 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 10325 71.3 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
15596151 15596151 PRJNA1148190_P_NODE_275153_length_331_cov_1.193798_g263982_i0 PRJNA1148190 275153 331 1.193798 3.95147138 Betacoronavirus pandemicum 3418604 Viruses Viruses 82.4 3.98e-11   NTclustered gi|2165837707|emb|OV197600.1| 2697049 g263982 i0 87.342 33.5407854984894 79 0 22 6 259 331 29911 29985 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 11102 82.4 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
19419495 19419495 PRJNA1148190_P_NODE_28236_length_1358_cov_4.629572_g18826_i0 PRJNA1148190 28236 1358 4.629572 62.86958776 Betacoronavirus pandemicum 3418604 Viruses Viruses 75 2.97e-8   NTclustered gi|2155043488|emb|OV016109.1| 2697049 g18826 i0 86.486 7.92857142857143 74 2 5 3 1 67 30062 29990 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 10767 75 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
23248724 23248724 PRJNA1148190_P_NODE_489219_length_269_cov_1.066327_g478046_i0 PRJNA1148190 489219 269 1.066327 2.86841963 Betacoronavirus pandemicum 3418604 Viruses Viruses 62.1 4.09e-5   NTclustered gi|2165837707|emb|OV197600.1| 2697049 g478046 i0 100 37.6096654275093 33 0 12 0 1 33 29985 29953 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 10117 62.1 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
23249044 23249044 PRJNA1148190_P_NODE_513879_length_264_cov_1.246073_g502706_i0 PRJNA1148190 513879 264 1.246073 3.28963272 Betacoronavirus pandemicum 3418604 Viruses Viruses 86.1 2.38e-12   NTclustered gi|2155043488|emb|OV016109.1| 2697049 g502706 i0 91.935 32.0795454545455 62 3 23 2 204 264 30000 30060 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 8469 86.1 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
24520884 24520884 PRJNA1148190_P_NODE_385600_length_289_cov_1.379630_g374427_i0 PRJNA1148190 385600 289 1.37963 3.9871307 Betacoronavirus pandemicum 3418604 Viruses Viruses 75 5.71e-9   NTclustered gi|2155043488|emb|OV016109.1| 2697049 g374427 i0 88.889 37.4152249134948 63 3 21 4 1 62 30062 30003 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 10813 75 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
27735130 27735130 PRJNA1148190_P_NODE_560324_length_255_cov_1.362637_g549151_i0 PRJNA1148190 560324 255 1.362637 3.47472435 Ripithav virus 3130922 Viruses Viruses 42.7 0.0424   NR WZH60556.1 3130922 g549151 i0 29.5 0.917647058823529 78 53 91.8 1 249 16 269 344 WZH60556.1 MAG: putative capsid protein [Ripithav virus] diamond 234 42.7 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Picobirnaviridae   Ripithav virus
30324391 30324391 PRJNA1148190_P_NODE_36032_length_1107_cov_2.066731_g25876_i0 PRJNA1148190 36032 1107 2.066731 22.87871217 Ips partiti-like virus 1 3077388 Viruses Viruses 236 2.72e-70   NR WPV71143.1 3077388 g25876 i0 39.4 0.818428184281843 302 175 81.3 4 1059 160 63 358 WPV71143.1 MAG: hypothetical protein [Ips partiti-like virus 1] diamond 906 236 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Partitiviridae   Ips partiti-like virus 1
30513844 30513844 PRJNA1148190_P_NODE_632873_length_249_cov_0.875000_g621700_i0 PRJNA1148190 632873 249 0.875 2.17875 Ripikrak virus 3130541 Viruses Viruses 43.5 0.022   NR WZH59832.1 3130541 g621700 i0 35.6 1.04819277108434 87 51 98.8 3 3 248 2614 2700 WZH59832.1 MAG: RNA-dependent RNA polymerase [Ripikrak virus] diamond 261 43.5 1 Viruses   Orthornavirae Pisuviricota Stelpaviricetes Stellavirales Astroviridae   Ripikrak virus
32411438 32411438 PRJNA1148190_P_NODE_75919_length_632_cov_2.506261_g25876_i1 PRJNA1148190 75919 632 2.506261 15.83956952 Ips partiti-like virus 1 3077388 Viruses Viruses 126 2.28e-30   NR WPV71143.1 3077388 g25876 i1 36.9 1.7753164556962 187 112 87.8 3 584 30 63 245 WPV71143.1 MAG: hypothetical protein [Ips partiti-like virus 1] diamond 1122 126 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Partitiviridae   Ips partiti-like virus 1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;