RNAquarium Metadata Server
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contig_metadata

7 rows where bioproject = "PRJNA1148190" and tax_phylum = "Peploviricota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Peploviricota · 7 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1148190 · 7 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2841603 2841603 PRJNA1148190_P_NODE_123063_length_475_cov_4.967662_g111900_i0 PRJNA1148190 123063 475 4.967662 23.5963945 Cytomegalovirus cercopithecinebeta5 3050258 Viruses Viruses 878 0   NTclustered gi|6561411|gb|AF191072.1|AF191072 36452 g111900 i0 100 5 475 0 100 0 1 475 1512 1986 Stealth virus 1 clone 3B41, genomic sequence blastn 2375 878 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Cytomegalovirus Cytomegalovirus cercopithecinebeta5
2851765 2851765 PRJNA1148190_P_NODE_99823_length_535_cov_1.872294_g88668_i0 PRJNA1148190 99823 535 1.872294 10.0167729 Simplexvirus humanalpha1 3050292 Viruses Viruses 63.9 2.43e-5   NTclustered gi|1394356506|gb|MH160367.1| 10298 g88668 i0 95.122 0.766355140186916 41 1 7 1 145 184 75188 75148 Human alphaherpesvirus 1 strain HSV1-ORIGINAL-H1, partial genome blastn 410 63.9 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Simplexvirus Simplexvirus humanalpha1
7412286 7412286 PRJNA1148190_P_NODE_23306_length_1606_cov_4.445532_g14645_i0 PRJNA1148190 23306 1606 4.445532 71.39524392 root 1 Root_unresolved Root_unresolved 1018 0   NTclustered gi|6180217|gb|AF065660.2|AF065660 36452 g14645 i0 87.486 15.8125778331258 887 106 96 5 1 884 586 1470 Stealth virus 1 clone C1616 T3 blastn 25395 1024 0.994140625 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Cytomegalovirus Cytomegalovirus cercopithecinebeta5
11238522 11238522 PRJNA1148190_P_NODE_434589_length_279_cov_1.791262_g423416_i0 PRJNA1148190 434589 279 1.791262 4.99762098 Roseolovirus 40272 Viruses Viruses 52.8 0.026   NTclustered gi|1147809524|ref|NC_033620.1| 1940555 g423416 i0 100 0.200716845878136 28 0 10 0 30 57 133677 133704 Murine roseolovirus isolate YOK1, complete genome blastn 56 52.8 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Roseolovirus Murine roseolovirus
15064146 15064146 PRJNA1148190_P_NODE_84352_length_591_cov_4.372587_g73220_i0 PRJNA1148190 84352 591 4.372587 25.84198917 root 1 Root_unresolved Root_unresolved 793 0   NTclustered gi|6180217|gb|AF065660.2|AF065660 36452 g73220 i0 90.863 2 591 54 100 0 1 591 2837 3427 Stealth virus 1 clone C1616 T3 blastn 1182 793 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Cytomegalovirus Cytomegalovirus cercopithecinebeta5
15599897 15599897 PRJNA1148190_P_NODE_533173_length_260_cov_1.550802_g522000_i0 PRJNA1148190 533173 260 1.550802 4.0320852 Cytomegalovirus humanbeta5 3050295 Viruses Viruses 52.8 0.024   NTclustered gi|2213887936|gb|OK000911.1| 10359 g522000 i0 100 0.107692307692308 28 0 11 0 73 100 193267 193294 Human betaherpesvirus 5 strain DABE, complete genome blastn 28 52.8 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Cytomegalovirus Cytomegalovirus humanbeta5
30071664 30071664 PRJNA1148190_P_NODE_780072_length_241_cov_0.916667_g768899_i0 PRJNA1148190 780072 241 0.916667 2.20916747 Suid alphaherpesvirus 1 10345 Viruses Viruses 42.4 0.0492   NR AMR55904.1 10345 g768899 i0 56.1 0.510373443983402 41 11 48.5 3 123 239 814 849 AMR55904.1 helicase-primase primase subunit [Suid alphaherpesvirus 1] diamond 123 42.4 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Varicellovirus Varicellovirus suidalpha1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;