RNAquarium Metadata Server
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contig_metadata

5 rows where bioproject = "PRJNA1148190" and tax_phylum = "Cossaviricota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Cossaviricota · 5 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1148190 · 5 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2849946 2849946 PRJNA1148190_P_NODE_692703_length_245_cov_3.180233_g681530_i0 PRJNA1148190 692703 245 3.180233 7.79157085 Viruses 10239 Viruses Viruses 108 1.34e-27   NR QTE03962.1 2794463 g681530 i0 73.4 3.18367346938776 64 17 78.4 0 40 231 62 125 QTE03962.1 MAG: replication protein, partial [Accipiter gentilis parvoviridae sp.] diamond 780 108 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Accipiter gentilis parvoviridae sp.
23250727 23250727 PRJNA1148190_P_NODE_646639_length_248_cov_0.880000_g635466_i0 PRJNA1148190 646639 248 0.88 2.1824 Parvoviridae sp. 1940570 Viruses Viruses 198 2.7199999999999993e-46   NTclustered gi|2413975755|gb|OP933681.1| 1940570 g635466 i0 84.286 0.846774193548387 210 25 83 7 7 212 3366 3571 MAG: Parvoviridae sp. isolate fi099par3 replication protein and capsid protein genes, complete cds blastn 210 198 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Parvoviridae sp.
27387672 27387672 PRJNA1148190_P_NODE_573563_length_252_cov_2.039106_g562390_i0 PRJNA1148190 573563 252 2.039106 5.13854712 Emberiza spodocephala parvoviridae sp. 2794481 Viruses Viruses 76.3 6.5e-14   NR QTE03789.1 2794481 g562390 i0 52.1 0.845238095238095 71 29 78.6 1 236 39 258 328 QTE03789.1 MAG: structural protein [Emberiza spodocephala parvoviridae sp.] diamond 213 76.3 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Emberiza spodocephala parvoviridae sp.
28208063 28208063 PRJNA1148190_P_NODE_43846_length_941_cov_1.563364_g33267_i0 PRJNA1148190 43846 941 1.563364 14.71125524 Emberiza spodocephala parvoviridae sp. 2794481 Viruses Viruses 164 9.33e-42   NR QTE03789.1 2794481 g33267 i0 47.4 0.67268862911796 211 106 65.7 3 1 618 501 711 QTE03789.1 MAG: structural protein [Emberiza spodocephala parvoviridae sp.] diamond 633 164 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Emberiza spodocephala parvoviridae sp.
31367117 31367117 PRJNA1148190_P_NODE_515496_length_263_cov_2.521053_g504323_i0 PRJNA1148190 515496 263 2.521053 6.63036939 Parvoviridae sp. 1940570 Viruses Viruses 63.9 1.58e-9   NR XNT20749.1 1940570 g504323 i0 44.2 0.878326996197719 77 39 83.3 2 38 256 24 100 XNT20749.1 MAG: replication protein [Parvoviridae sp.] diamond 231 63.9 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Parvoviridae sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;