RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA1148190" and tax_phylum = "Candidatus Niyogiibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Niyogiibacteriota · 1 ✖

tax_clade 1

bioproject 1

  • PRJNA1148190 · 1 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29660835 29660835 PRJNA1148190_P_NODE_85910_length_585_cov_1.632812_g74777_i0 PRJNA1148190 85910 585 1.632812 9.5519502 Candidatus Niyogibacteria bacterium RIFCSPLOWO2_12_FULL_41_13 1801726 Bacteria Bacteria 246 3.08e-78   NR OGZ31570.1 1801726 g74777 i0 63.2 0.98974358974359 193 71 99 0 580 2 61 253 OGZ31570.1 MAG: hypothetical protein A3H02_02580 [Candidatus Niyogibacteria bacterium RIFCSPLOWO2_12_FULL_41_13] diamond 579 246 1 Bacteria Bacteria candidate phyla   Candidatus Niyogiibacteriota         Candidatus Niyogibacteria bacterium RIFCSPLOWO2_12_FULL_41_13

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;