RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1148190" and tax_phylum = "Candidatus Lithacetigenota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Lithacetigenota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1148190 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29407655 29407655 PRJNA1148190_P_NODE_270709_length_333_cov_1.184615_g259538_i0 PRJNA1148190 270709 333 1.184615 3.94476795 Candidatus Lithacetigena glycinireducens 2986055 Bacteria Bacteria 96.7 1.78e-22   NR MBT9165332.1 2986055 g259538 i0 55.7 1.76576576576577 97 41 85.6 1 48 332 5 101 MBT9165332.1 hypothetical protein [Candidatus Lithacetigena glycinireducens] diamond 588 96.7 1 Bacteria   Bacillati Candidatus Lithacetigenota       Candidatus Lithacetigena Candidatus Lithacetigena glycinireducens
30387020 30387020 PRJNA1148190_P_NODE_134573_length_454_cov_1.212598_g123409_i0 PRJNA1148190 134573 454 1.212598 5.50519492 Candidatus Lithacetigena glycinireducens 2986055 Bacteria Bacteria 142 9.1e-40   NR MBT9165332.1 2986055 g123409 i0 53.7 4.38766519823789 134 55 85.2 3 2 388 46 177 MBT9165332.1 hypothetical protein [Candidatus Lithacetigena glycinireducens] diamond 1992 142 1 Bacteria   Bacillati Candidatus Lithacetigenota       Candidatus Lithacetigena Candidatus Lithacetigena glycinireducens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;