RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1148190" and tax_phylum = "Candidatus Kryptoniota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Kryptoniota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1148190 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30165786 30165786 PRJNA1148190_P_NODE_423232_length_282_cov_1.014354_g412059_i0 PRJNA1148190 423232 282 1.014354 2.86047828 Candidatus Kryptoniota bacterium 2268186 Bacteria Bacteria 94.4 4.12e-20   NR HEY9166168.1 2268186 g412059 i0 65.3 0.765957446808511 72 24 76.6 1 5 220 214 284 HEY9166168.1 hypothetical protein [Candidatus Kryptoniota bacterium] diamond 216 94.4 1 Bacteria FCB group Pseudomonadati Candidatus Kryptoniota         Candidatus Kryptoniota bacterium
31271988 31271988 PRJNA1148190_P_NODE_457375_length_275_cov_1.232673_g446202_i0 PRJNA1148190 457375 275 1.232673 3.38985075 Candidatus Kryptoniota bacterium 2268186 Bacteria Bacteria 125 1.7299999999999998e-31   NR HUI27419.1 2268186 g446202 i0 74.4 0.850909090909091 78 20 85.1 0 234 1 5 82 HUI27419.1 alcohol dehydrogenase catalytic domain-containing protein [Candidatus Kryptoniota bacterium] diamond 234 125 1 Bacteria FCB group Pseudomonadati Candidatus Kryptoniota         Candidatus Kryptoniota bacterium
32714735 32714735 PRJNA1148190_P_NODE_417280_length_283_cov_1.180952_g406107_i0 PRJNA1148190 417280 283 1.180952 3.34209416 Pseudomonadati 3379134 Bacteria Bacteria 120 7.579999999999999e-31   NR WP_082360018.1 1633631 g406107 i0 57.6 19.3992932862191 92 39 97.5 0 7 282 82 173 WP_082360018.1 DUF4921 family protein, partial [Candidatus Kryptonium thompsonii] diamond 5490 121 0.991735537190083 Bacteria FCB group Pseudomonadati Candidatus Kryptoniota       Candidatus Kryptonium Candidatus Kryptonium thompsonii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;