RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1148190" and tax_phylum = "Candidatus Edwardsiibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Edwardsiibacteriota · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA1148190 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29502116 29502116 PRJNA1148190_P_NODE_159190_length_417_cov_1.491279_g148023_i0 PRJNA1148190 159190 417 1.491279 6.21863343 Candidatus Edwardsbacteria bacterium 2053551 Bacteria Bacteria 47.8 0.00128   NR MEW6687264.1 2053551 g148023 i0 31.1 0.762589928057554 106 54 65.5 5 276 4 5 106 MEW6687264.1 hypothetical protein [Candidatus Edwardsbacteria bacterium] diamond 318 47.8 1 Bacteria Bacteria candidate phyla   Candidatus Edwardsiibacteriota         Candidatus Edwardsbacteria bacterium
30607818 30607818 PRJNA1148190_P_NODE_226153_length_357_cov_2.063380_g214983_i0 PRJNA1148190 226153 357 2.06338 7.3662666 Candidatus Edwardsbacteria bacterium 2053551 Bacteria Bacteria 44.3 0.00747   NR MCU0608023.1 2053551 g214983 i0 29.9 0.73109243697479 87 50 66.4 2 76 312 18 101 MCU0608023.1 hypothetical protein [Candidatus Edwardsbacteria bacterium] diamond 261 44.3 1 Bacteria Bacteria candidate phyla   Candidatus Edwardsiibacteriota         Candidatus Edwardsbacteria bacterium
32304472 32304472 PRJNA1148190_P_NODE_430879_length_280_cov_1.429952_g419706_i0 PRJNA1148190 430879 280 1.429952 4.0038656 Bacteria 2 Bacteria Bacteria 155 2.5899999999999993e-46   NR MDI6740731.1 2053551 g419706 i0 71.9 7.84285714285714 89 25 95.4 0 2 268 7 95 MDI6740731.1 IS200/IS605 family transposase [Candidatus Edwardsbacteria bacterium] diamond 2196 155 1 Bacteria Bacteria candidate phyla   Candidatus Edwardsiibacteriota         Candidatus Edwardsbacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;