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contig_metadata

30 rows where bioproject = "PRJNA1148190" and tax_phylum = "Candidatus Daviesiibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Daviesiibacteriota · 30 ✖

tax_clade 1

bioproject 1

  • PRJNA1148190 · 30 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11772013 11772013 PRJNA1148190_P_NODE_27710_length_1383_cov_1.460305_g18367_i0 PRJNA1148190 27710 1383 1.460305 20.19601815 root 1 Root_unresolved Root_unresolved 540 6.329999999999998e-187   NR KKS13744.1 1618429 g18367 i0 73.9 2.32971800433839 357 92 77.4 1 1 1071 129 484 KKS13744.1 MAG: N-6 DNA methylase [Candidatus Daviesbacteria bacterium GW2011_GWB1_41_5] diamond 3222 541 0.99815157116451 Bacteria Bacteria candidate phyla   Candidatus Daviesiibacteriota         Candidatus Daviesbacteria bacterium GW2011_GWB1_41_5
26912919 26912919 PRJNA1148190_P_NODE_43722_length_943_cov_2.105747_g33151_i0 PRJNA1148190 43722 943 2.105747 19.85719421 Candidatus Daviesbacteria bacterium RIFCSPHIGHO2_12_FULL_43_11 1797780 Bacteria Bacteria 168 3.76e-47   NR OGE34233.1 1797780 g33151 i0 62.5 1.16118769883351 120 45 38.2 0 4 363 97 216 OGE34233.1 MAG: hypothetical protein A3E45_04550 [Candidatus Daviesbacteria bacterium RIFCSPHIGHO2_12_FULL_43_11] diamond 1095 168 1 Bacteria Bacteria candidate phyla   Candidatus Daviesiibacteriota         Candidatus Daviesbacteria bacterium RIFCSPHIGHO2_12_FULL_43_11
27103238 27103238 PRJNA1148190_P_NODE_745742_length_243_cov_0.905882_g734569_i0 PRJNA1148190 745742 243 0.905882 2.20129326 Candidatus Daviesbacteria bacterium 2053542 Bacteria Bacteria 121 5.519999999999999e-31   NR MBI2019411.1 2053542 g734569 i0 68.8 4.75308641975309 77 24 95.1 0 231 1 1 77 MBI2019411.1 tRNA-dihydrouridine synthase [Candidatus Daviesbacteria bacterium] diamond 1155 121 1 Bacteria Bacteria candidate phyla   Candidatus Daviesiibacteriota         Candidatus Daviesbacteria bacterium
27671880 27671880 PRJNA1148190_P_NODE_58364_length_756_cov_3.005857_g47400_i0 PRJNA1148190 58364 756 3.005857 22.72427892 Candidatus Daviesbacteria bacterium 2053542 Bacteria Bacteria 198 7.48e-54   NR MBI2596621.1 2053542 g47400 i0 43.4 2.92460317460317 249 138 98.8 3 749 3 406 651 MBI2596621.1 hypothetical protein [Candidatus Daviesbacteria bacterium] diamond 2211 198 1 Bacteria Bacteria candidate phyla   Candidatus Daviesiibacteriota         Candidatus Daviesbacteria bacterium
27703498 27703498 PRJNA1148190_P_NODE_519064_length_263_cov_1.231579_g507891_i0 PRJNA1148190 519064 263 1.231579 3.23905277 Candidatus Daviesbacteria bacterium 2053542 Bacteria Bacteria 63.9 1.64e-9   NR MBI4036059.1 2053542 g507891 i0 61.9 0.958174904942966 42 16 47.9 0 127 2 1 42 MBI4036059.1 ATP-dependent DNA helicase RecG [Candidatus Daviesbacteria bacterium] diamond 252 63.9 1 Bacteria Bacteria candidate phyla   Candidatus Daviesiibacteriota         Candidatus Daviesbacteria bacterium
27986750 27986750 PRJNA1148190_P_NODE_18325_length_1979_cov_1.471144_g10701_i0 PRJNA1148190 18325 1979 1.471144 29.11393976 Candidatus Daviesbacteria bacterium 2053542 Bacteria Bacteria 247 1.11e-72   NR MBI2595573.1 2053542 g10701 i0 59.4 0.962607377463365 212 85 32 1 1634 1002 9 220 MBI2595573.1 recombinase family protein [Candidatus Daviesbacteria bacterium] diamond 1905 247 1 Bacteria Bacteria candidate phyla   Candidatus Daviesiibacteriota         Candidatus Daviesbacteria bacterium
28133705 28133705 PRJNA1148190_P_NODE_94885_length_551_cov_1.376569_g83737_i0 PRJNA1148190 94885 551 1.376569 7.58489519 Bacteria 2 Bacteria Bacteria 325 1.26e-103   NR KKS13742.1 1618429 g83737 i0 85.2 3.98548094373866 183 27 99.6 0 3 551 280 462 KKS13742.1 MAG: Type I site-specific deoxyribonuclease [Candidatus Daviesbacteria bacterium GW2011_GWB1_41_5] diamond 2196 328 0.990853658536585 Bacteria Bacteria candidate phyla   Candidatus Daviesiibacteriota         Candidatus Daviesbacteria bacterium GW2011_GWB1_41_5
28196496 28196496 PRJNA1148190_P_NODE_589066_length_251_cov_0.865169_g577893_i0 PRJNA1148190 589066 251 0.865169 2.17157419 Bacteria 2 Bacteria Bacteria 91.7 1.7e-21   NR OGE32704.1 1797774 g577893 i0 68.8 1.76892430278884 64 20 76.5 0 193 2 1 64 OGE32704.1 MAG: hypothetical protein A3D83_04015 [Candidatus Daviesbacteria bacterium RIFCSPHIGHO2_02_FULL_41_10] diamond 444 91.7 1 Bacteria Bacteria candidate phyla   Candidatus Daviesiibacteriota         Candidatus Daviesbacteria bacterium RIFCSPHIGHO2_02_FULL_41_10
28745070 28745070 PRJNA1148190_P_NODE_486227_length_269_cov_1.571429_g475054_i0 PRJNA1148190 486227 269 1.571429 4.22714401 Candidatus Daviesbacteria bacterium 2053542 Bacteria Bacteria 127 5.64e-35   NR MDD2822797.1 2053542 g475054 i0 76.2 0.936802973977695 84 20 93.7 0 268 17 18 101 MDD2822797.1 hypothetical protein [Candidatus Daviesbacteria bacterium] diamond 252 127 1 Bacteria Bacteria candidate phyla   Candidatus Daviesiibacteriota         Candidatus Daviesbacteria bacterium
28871107 28871107 PRJNA1148190_P_NODE_40568_length_1001_cov_2.100216_g30148_i0 PRJNA1148190 40568 1001 2.100216 21.02316216 Candidatus Daviesbacteria bacterium 2053542 Bacteria Bacteria 242 1.4899999999999999e-74   NR MDP2672158.1 2053542 g30148 i0 50.8 0.755244755244755 252 122 74.9 2 750 1 1 252 MDP2672158.1 EamA family transporter [Candidatus Daviesbacteria bacterium] diamond 756 242 1 Bacteria Bacteria candidate phyla   Candidatus Daviesiibacteriota         Candidatus Daviesbacteria bacterium
28934250 28934250 PRJNA1148190_P_NODE_298408_length_320_cov_1.979757_g287235_i0 PRJNA1148190 298408 320 1.979757 6.3352224 Candidatus Daviesbacteria bacterium 2053542 Bacteria Bacteria 79.3 1.49e-15   NR MBI2595506.1 2053542 g287235 i0 62.7 1.434375 51 19 47.8 0 1 153 154 204 MBI2595506.1 3'-5' exoribonuclease [Candidatus Daviesbacteria bacterium] diamond 459 79.3 1 Bacteria Bacteria candidate phyla   Candidatus Daviesiibacteriota         Candidatus Daviesbacteria bacterium
29029691 29029691 PRJNA1148190_P_NODE_609388_length_250_cov_0.870056_g598215_i0 PRJNA1148190 609388 250 0.870056 2.17514 Candidatus Daviesbacteria bacterium 2053542 Bacteria Bacteria 140 6.8399999999999995e-37   NR MDO8619191.1 2053542 g598215 i0 74.4 0.984 82 21 98.4 0 3 248 132 213 MDO8619191.1 glycosyltransferase family 39 protein [Candidatus Daviesbacteria bacterium] diamond 246 140 1 Bacteria Bacteria candidate phyla   Candidatus Daviesiibacteriota         Candidatus Daviesbacteria bacterium
29250476 29250476 PRJNA1148190_P_NODE_726649_length_244_cov_0.900585_g715476_i0 PRJNA1148190 726649 244 0.900585 2.1974274 Candidatus Daviesbacteria bacterium 2053542 Bacteria Bacteria 104 5.899999999999999e-24   NR MBI2022791.1 2053542 g715476 i0 61.7 0.995901639344262 81 30 98.4 1 2 241 3 83 MBI2022791.1 DNA-directed RNA polymerase subunit beta [Candidatus Daviesbacteria bacterium] diamond 243 104 1 Bacteria Bacteria candidate phyla   Candidatus Daviesiibacteriota         Candidatus Daviesbacteria bacterium
29471380 29471380 PRJNA1148190_P_NODE_75350_length_635_cov_1.957295_g64241_i0 PRJNA1148190 75350 635 1.957295 12.42882325 Candidatus Daviesbacteria bacterium 2053542 Bacteria Bacteria 141 9.449999999999999e-35   NR MBI4038453.1 2053542 g64241 i0 44.3 3.14173228346457 167 86 78.9 2 117 617 45 204 MBI4038453.1 hypothetical protein [Candidatus Daviesbacteria bacterium] diamond 1995 141 1 Bacteria Bacteria candidate phyla   Candidatus Daviesiibacteriota         Candidatus Daviesbacteria bacterium
29882152 29882152 PRJNA1148190_P_NODE_594091_length_251_cov_0.865169_g582918_i0 PRJNA1148190 594091 251 0.865169 2.17157419 Candidatus Daviesbacteria bacterium 2053542 Bacteria Bacteria 67.8 6.38e-11   NR MBI2021947.1 2053542 g582918 i0 48.6 0.884462151394422 74 38 88.4 0 1 222 1485 1558 MBI2021947.1 protein phosphatase 2C domain-containing protein [Candidatus Daviesbacteria bacterium] diamond 222 67.8 1 Bacteria Bacteria candidate phyla   Candidatus Daviesiibacteriota         Candidatus Daviesbacteria bacterium
29945547 29945547 PRJNA1148190_P_NODE_790431_length_241_cov_0.916667_g779258_i0 PRJNA1148190 790431 241 0.916667 2.20916747 Candidatus Daviesbacteria bacterium GW2 2053542 Bacteria Bacteria 96.3 8.559999999999999e-23   NR KKQ78434.1 1618418 g779258 i0 73.3 0.746887966804979 60 16 74.7 0 60 239 1 60 KKQ78434.1 MAG: Deoxycytidine deaminase [Candidatus Daviesbacteria bacterium GW2011_GWA1_38_7] diamond 180 96.3 1 Bacteria Bacteria candidate phyla   Candidatus Daviesiibacteriota         Candidatus Daviesbacteria bacterium GW2011_GWA1_38_7
30249354 30249354 PRJNA1148190_P_NODE_293932_length_322_cov_1.815261_g282759_i0 PRJNA1148190 293932 322 1.815261 5.84514042 Bacteria 2 Bacteria Bacteria 207 2.57e-60   NR KKR23392.1 1618427 g282759 i0 99.1 6.97826086956522 107 1 99.7 0 321 1 663 769 KKR23392.1 MAG: hypothetical protein UT54_C0050G0005 [Candidatus Daviesbacteria bacterium GW2011_GWB1_39_5] diamond 2247 207 1 Bacteria Bacteria candidate phyla   Candidatus Daviesiibacteriota         Candidatus Daviesbacteria bacterium GW2011_GWB1_39_5
30260453 30260453 PRJNA1148190_P_NODE_117852_length_487_cov_1.275362_g106690_i0 PRJNA1148190 117852 487 1.275362 6.21101294 Candidatus Daviesbacteria bacterium RIFCSPHIGHO2_ 2053542 Bacteria Bacteria 60.5 1.55e-7   NR OGE19362.1 1797764 g106690 i0 33.3 0.887063655030801 144 79 80.7 5 14 406 33 172 OGE19362.1 MAG: hypothetical protein A2871_00745 [Candidatus Daviesbacteria bacterium RIFCSPHIGHO2_01_FULL_41_23] diamond 432 60.5 1 Bacteria Bacteria candidate phyla   Candidatus Daviesiibacteriota         Candidatus Daviesbacteria bacterium RIFCSPHIGHO2_01_FULL_41_23
30292686 30292686 PRJNA1148190_P_NODE_39472_length_1024_cov_1.592008_g29108_i0 PRJNA1148190 39472 1024 1.592008 16.30216192 Candidatus Daviesbacteria bacterium 2053542 Bacteria Bacteria 139 1.97e-36   NR MBI3486273.1 2053542 g29108 i0 53.1 0.7822265625 130 61 38.1 0 951 562 4 133 MBI3486273.1 hypothetical protein [Candidatus Daviesbacteria bacterium] diamond 801 139 1 Bacteria Bacteria candidate phyla   Candidatus Daviesiibacteriota         Candidatus Daviesbacteria bacterium
30450923 30450923 PRJNA1148190_P_NODE_635993_length_248_cov_1.760000_g624820_i0 PRJNA1148190 635993 248 1.76 4.3648 Candidatus Daviesbacteria bacterium RIFCSPHIGHO2_ 2053542 Bacteria Bacteria 58.2 1.51e-7   NR OGE31434.1 1797768 g624820 i0 54.4 1.53629032258065 68 27 82.3 2 209 6 84 147 OGE31434.1 MAG: hypothetical protein A3C59_02225 [Candidatus Daviesbacteria bacterium RIFCSPHIGHO2_02_FULL_36_13] diamond 381 58.2 1 Bacteria Bacteria candidate phyla   Candidatus Daviesiibacteriota         Candidatus Daviesbacteria bacterium RIFCSPHIGHO2_02_FULL_36_13
30735047 30735047 PRJNA1148190_P_NODE_663774_length_247_cov_0.885057_g652601_i0 PRJNA1148190 663774 247 0.885057 2.18609079 Candidatus Daviesbacteria bacterium 2053542 Bacteria Bacteria 72 3.87e-13   NR MBI2593225.1 2053542 g652601 i0 50.6 0.983805668016194 81 38 98.4 1 247 5 52 130 MBI2593225.1 hypothetical protein [Candidatus Daviesbacteria bacterium] diamond 243 72 1 Bacteria Bacteria candidate phyla   Candidatus Daviesiibacteriota         Candidatus Daviesbacteria bacterium
30817853 30817853 PRJNA1148190_P_NODE_370394_length_293_cov_1.400000_g359221_i0 PRJNA1148190 370394 293 1.4 4.102 root 1 Root_unresolved Root_unresolved 132 6.06e-34   NR KKS13744.1 1618429 g359221 i0 74.4 3.25597269624573 82 21 84 0 248 3 4 85 KKS13744.1 MAG: N-6 DNA methylase [Candidatus Daviesbacteria bacterium GW2011_GWB1_41_5] diamond 954 132 1 Bacteria Bacteria candidate phyla   Candidatus Daviesiibacteriota         Candidatus Daviesbacteria bacterium GW2011_GWB1_41_5
30860870 30860870 PRJNA1148190_P_NODE_294_length_29648_cov_14.942215_g165_i0 PRJNA1148190 294 29648 14.942215 4430.0679032 Candidatus Daviesbacteria bacterium 2053542 Bacteria Bacteria 773 1.9099999999999995e-246   NR MCR4306303.1 2053542 g165 i0 62.4 0.0611171073934161 604 219 6.1 6 6755 8557 7 605 MCR4306303.1 hypothetical protein [Candidatus Daviesbacteria bacterium] diamond 1812 773 1 Bacteria Bacteria candidate phyla   Candidatus Daviesiibacteriota         Candidatus Daviesbacteria bacterium
31082296 31082296 PRJNA1148190_P_NODE_425915_length_281_cov_1.418269_g414742_i0 PRJNA1148190 425915 281 1.418269 3.98533589 Candidatus Daviesbacteria bacterium 2053542 Bacteria Bacteria 112 2.15e-28   NR MCR4306245.1 2053542 g414742 i0 71.2 0.779359430604982 73 21 77.9 0 61 279 1 73 MCR4306245.1 hypothetical protein [Candidatus Daviesbacteria bacterium] diamond 219 112 1 Bacteria Bacteria candidate phyla   Candidatus Daviesiibacteriota         Candidatus Daviesbacteria bacterium
31429580 31429580 PRJNA1148190_P_NODE_216716_length_364_cov_1.058419_g205546_i0 PRJNA1148190 216716 364 1.058419 3.85264516 Candidatus Daviesbacteria bacterium 2053542 Bacteria Bacteria 130 1.23e-32   NR MBI2021362.1 2053542 g205546 i0 53.1 1.07142857142857 130 51 98.9 2 362 3 395 524 MBI2021362.1 arginine--tRNA ligase [Candidatus Daviesbacteria bacterium] diamond 390 130 1 Bacteria Bacteria candidate phyla   Candidatus Daviesiibacteriota         Candidatus Daviesbacteria bacterium
31430026 31430026 PRJNA1148190_P_NODE_452376_length_276_cov_1.216749_g441203_i0 PRJNA1148190 452376 276 1.216749 3.35822724 Candidatus Daviesbacteria bacterium 2053542 Bacteria Bacteria 119 1.02e-29   NR MBI2601334.1 2053542 g441203 i0 63.2 2.8804347826087 87 32 94.6 0 14 274 120 206 MBI2601334.1 glycosyltransferase family 4 protein [Candidatus Daviesbacteria bacterium] diamond 795 119 1 Bacteria Bacteria candidate phyla   Candidatus Daviesiibacteriota         Candidatus Daviesbacteria bacterium
31651040 31651040 PRJNA1148190_P_NODE_317557_length_312_cov_2.598326_g306384_i0 PRJNA1148190 317557 312 2.598326 8.10677712 Candidatus Daviesbacteria bacterium RIFCSPLOWO2_ 2053542 Bacteria Bacteria 51.2 5.8e-5   NR OGE65012.1 1797792 g306384 i0 39.2 0.711538461538462 74 45 71.2 0 244 23 146 219 OGE65012.1 MAG: hypothetical protein A3I48_02135 [Candidatus Daviesbacteria bacterium RIFCSPLOWO2_02_FULL_36_7] diamond 222 51.2 1 Bacteria Bacteria candidate phyla   Candidatus Daviesiibacteriota         Candidatus Daviesbacteria bacterium RIFCSPLOWO2_02_FULL_36_7
32631913 32631913 PRJNA1148190_P_NODE_566220_length_254_cov_1.276243_g555047_i0 PRJNA1148190 566220 254 1.276243 3.24165722 Candidatus Daviesbacteria bacterium 2053542 Bacteria Bacteria 89.7 1.25e-18   NR MDP3973681.1 2053542 g555047 i0 53.8 1.88976377952756 80 37 94.5 0 13 252 74 153 MDP3973681.1 hypothetical protein [Candidatus Daviesbacteria bacterium] diamond 480 89.7 1 Bacteria Bacteria candidate phyla   Candidatus Daviesiibacteriota         Candidatus Daviesbacteria bacterium
32663443 32663443 PRJNA1148190_P_NODE_565500_length_254_cov_1.364641_g554327_i0 PRJNA1148190 565500 254 1.364641 3.46618814 Candidatus Daviesbacteria bacterium GW2 2053542 Bacteria Bacteria 115 2.51e-28   NR KKQ80437.1 1618418 g554327 i0 65.5 1.98425196850394 84 29 99.2 0 254 3 138 221 KKQ80437.1 MAG: Glycosyl hydrolase, family 18 [Candidatus Daviesbacteria bacterium GW2011_GWA1_38_7] diamond 504 115 1 Bacteria Bacteria candidate phyla   Candidatus Daviesiibacteriota         Candidatus Daviesbacteria bacterium GW2011_GWA1_38_7
32789081 32789081 PRJNA1148190_P_NODE_383740_length_289_cov_2.129630_g372567_i0 PRJNA1148190 383740 289 2.12963 6.1546307 Candidatus Daviesbacteria bacterium RIFCSPLOWO2_ 2053542 Bacteria Bacteria 146 1.13e-40   NR OGE64391.1 1797792 g372567 i0 72.6 1.98269896193772 95 26 98.6 0 289 5 29 123 OGE64391.1 MAG: tryptophan--tRNA ligase [Candidatus Daviesbacteria bacterium RIFCSPLOWO2_02_FULL_36_7] diamond 573 146 1 Bacteria Bacteria candidate phyla   Candidatus Daviesiibacteriota         Candidatus Daviesbacteria bacterium RIFCSPLOWO2_02_FULL_36_7

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;