RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1148190" and tax_phylum = "Candidatus Cryosericota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Cryosericota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1148190 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28902718 28902718 PRJNA1148190_P_NODE_494588_length_268_cov_0.958974_g483415_i0 PRJNA1148190 494588 268 0.958974 2.57005032 Candidatus Cryosericum sp. 2815585 Bacteria Bacteria 87.8 1.53e-19   NR HOV51186.1 2815585 g483415 i0 47.6 0.917910447761194 82 42 91.8 1 4 249 66 146 HOV51186.1 pyrimidine dimer DNA glycosylase/endonuclease V [Candidatus Cryosericum sp.] diamond 246 87.8 1 Bacteria Caldisericota/Cryosericota group Pseudomonadati Candidatus Cryosericota Candidatus Cryosericia Candidatus Cryosericales Candidatus Cryosericaceae Candidatus Cryosericum Candidatus Cryosericum sp.
31430024 31430024 PRJNA1148190_P_NODE_450796_length_276_cov_1.502463_g439623_i0 PRJNA1148190 450796 276 1.502463 4.14679788 Candidatus Cryosericum sp. 2815585 Bacteria Bacteria 81.3 2.48e-17   NR HPS70581.1 2815585 g439623 i0 73.5 1.07608695652174 49 13 53.3 0 148 2 34 82 HPS70581.1 hypothetical protein [Candidatus Cryosericum sp.] diamond 297 81.3 1 Bacteria Caldisericota/Cryosericota group Pseudomonadati Candidatus Cryosericota Candidatus Cryosericia Candidatus Cryosericales Candidatus Cryosericaceae Candidatus Cryosericum Candidatus Cryosericum sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;