RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

23 rows where bioproject = "PRJNA1148190" and tax_phylum = "Candidatus Campbelliibacteriota"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Campbelliibacteriota · 23 ✖

tax_clade 1

bioproject 1

  • PRJNA1148190 · 23 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5402396 5402396 PRJNA1148190_P_NODE_716485_length_244_cov_1.350877_g705312_i0 PRJNA1148190 716485 244 1.350877 3.29613988 Candidatus Campbellbacteria bacterium GW2011_OD1_34_28 1618633 Bacteria Bacteria 198 2.67e-46   NTclustered gi|837353685|gb|CP011215.1| 1618633 g705312 i0 82.328 0.950819672131147 232 38 95 3 14 244 720948 720719 MAG: Candidatus Campbellbacteria bacterium GW2011_OD1_34_28 chromosome, complete genome blastn 232 198 1 Bacteria Bacteria candidate phyla   Candidatus Campbelliibacteriota         Candidatus Campbellbacteria bacterium GW2011_OD1_34_28
9223210 9223210 PRJNA1148190_P_NODE_399788_length_286_cov_1.624413_g388615_i0 PRJNA1148190 399788 286 1.624413 4.64582118 Bacteria 2 Bacteria Bacteria 179 5.149999999999999e-52   NR MAQ77375.1 2026716 g388615 i0 96.8 3.98601398601399 95 3 99.7 0 2 286 209 303 MAQ77375.1 F0F1 ATP synthase subunit beta [Candidatus Campbellbacteria bacterium] diamond 1140 180 0.994444444444444 Bacteria Bacteria candidate phyla   Candidatus Campbelliibacteriota         Candidatus Campbellbacteria bacterium
10500583 10500583 PRJNA1148190_P_NODE_522169_length_262_cov_1.629630_g510996_i0 PRJNA1148190 522169 262 1.62963 4.2696306 Candidatus Campbellbacteria bacterium GW2011_OD1_34_28 1618633 Bacteria Bacteria 335 2.119999999999999e-87   NTclustered gi|837353685|gb|CP011215.1| 1618633 g510996 i0 89.85 193.43893129771 266 20 100 4 1 262 8015 8277 MAG: Candidatus Campbellbacteria bacterium GW2011_OD1_34_28 chromosome, complete genome blastn 50681 335 1 Bacteria Bacteria candidate phyla   Candidatus Campbelliibacteriota         Candidatus Campbellbacteria bacterium GW2011_OD1_34_28
11776934 11776934 PRJNA1148190_P_NODE_631330_length_249_cov_0.875000_g620157_i0 PRJNA1148190 631330 249 0.875 2.17875 Candidatus Campbellbacteria bacterium GW2011_OD1_34_28 1618633 Bacteria Bacteria 84.2 7.99e-12   NTclustered gi|837353685|gb|CP011215.1| 1618633 g620157 i0 86.25 0.321285140562249 80 7 31 4 129 206 182114 182191 MAG: Candidatus Campbellbacteria bacterium GW2011_OD1_34_28 chromosome, complete genome blastn 80 84.2 1 Bacteria Bacteria candidate phyla   Candidatus Campbelliibacteriota         Candidatus Campbellbacteria bacterium GW2011_OD1_34_28
14323192 14323192 PRJNA1148190_P_NODE_339992_length_304_cov_1.333333_g328819_i0 PRJNA1148190 339992 304 1.333333 4.05333232 Candidatus Campbellbacteria bacterium 2026716 Bacteria Bacteria 302 2.55e-77   NTclustered gi|1958034697|gb|CP064977.1| 2026716 g328819 i0 90.041 0.792763157894737 241 13 76 7 1 231 53716 53955 MAG: Candidatus Campbellbacteria bacterium isolate EsbW_18-Q3-R4-48_MAXAC.283_fly_man chromosome, complete genome blastn 241 302 1 Bacteria Bacteria candidate phyla   Candidatus Campbelliibacteriota         Candidatus Campbellbacteria bacterium
15598407 15598407 PRJNA1148190_P_NODE_425493_length_281_cov_1.480769_g414320_i0 PRJNA1148190 425493 281 1.480769 4.16096089 Candidatus Campbellbacteria bacterium 2026716 Bacteria Bacteria 193 1.46e-44   NTclustered gi|1958034697|gb|CP064977.1| 2026716 g414320 i0 81.008 0.918149466192171 258 36 92 9 1 258 769567 769811 MAG: Candidatus Campbellbacteria bacterium isolate EsbW_18-Q3-R4-48_MAXAC.283_fly_man chromosome, complete genome blastn 258 193 1 Bacteria Bacteria candidate phyla   Candidatus Campbelliibacteriota         Candidatus Campbellbacteria bacterium
18149702 18149702 PRJNA1148190_P_NODE_606135_length_250_cov_0.870056_g594962_i0 PRJNA1148190 606135 250 0.870056 2.17514 Candidatus Campbellbacteria bacterium 2026716 Bacteria Bacteria 307 4.3800000000000005e-79   NTclustered gi|1958034697|gb|CP064977.1| 2026716 g594962 i0 89.113 0.992 248 25 99 2 1 247 769798 770044 MAG: Candidatus Campbellbacteria bacterium isolate EsbW_18-Q3-R4-48_MAXAC.283_fly_man chromosome, complete genome blastn 248 307 1 Bacteria Bacteria candidate phyla   Candidatus Campbelliibacteriota         Candidatus Campbellbacteria bacterium
18149761 18149761 PRJNA1148190_P_NODE_611275_length_250_cov_0.870056_g600102_i0 PRJNA1148190 611275 250 0.870056 2.17514 Candidatus Campbellbacteria bacterium 2026716 Bacteria Bacteria 110 1.32e-19   NTclustered gi|1958034697|gb|CP064977.1| 2026716 g600102 i0 98.387 2.328 62 1 25 0 189 250 508806 508867 MAG: Candidatus Campbellbacteria bacterium isolate EsbW_18-Q3-R4-48_MAXAC.283_fly_man chromosome, complete genome blastn 582 110 1 Bacteria Bacteria candidate phyla   Candidatus Campbelliibacteriota         Candidatus Campbellbacteria bacterium
19420712 19420712 PRJNA1148190_P_NODE_358996_length_297_cov_1.441964_g347823_i0 PRJNA1148190 358996 297 1.441964 4.28263308 Candidatus Campbellbacteria bacterium GW2011_OD1_34_28 1618633 Bacteria Bacteria 84.2 9.78e-12   NTclustered gi|837353685|gb|CP011215.1| 1618633 g347823 i0 85.897 4.23905723905724 78 11 26 0 63 140 494040 494117 MAG: Candidatus Campbellbacteria bacterium GW2011_OD1_34_28 chromosome, complete genome blastn 1259 84.2 1 Bacteria Bacteria candidate phyla   Candidatus Campbelliibacteriota         Candidatus Campbellbacteria bacterium GW2011_OD1_34_28
20696498 20696498 PRJNA1148190_P_NODE_392077_length_288_cov_1.153488_g380904_i0 PRJNA1148190 392077 288 1.153488 3.32204544 Candidatus Campbellbacteria bacterium GW2011_OD1_34_28 1618633 Bacteria Bacteria 95.3 4.36e-15   NTclustered gi|837353685|gb|CP011215.1| 1618633 g380904 i0 92.537 0.881944444444444 67 4 23 1 5 71 494103 494038 MAG: Candidatus Campbellbacteria bacterium GW2011_OD1_34_28 chromosome, complete genome blastn 254 95.3 1 Bacteria Bacteria candidate phyla   Candidatus Campbelliibacteriota         Candidatus Campbellbacteria bacterium GW2011_OD1_34_28
21969830 21969830 PRJNA1148190_P_NODE_256938_length_340_cov_1.052434_g245768_i0 PRJNA1148190 256938 340 1.052434 3.5782756 Candidatus Campbellbacteria bacterium 2026716 Bacteria Bacteria 529 1.2199999999999994e-145   NTclustered gi|1958034697|gb|CP064977.1| 2026716 g245768 i0 94.737 2.96470588235294 342 14 100 4 1 340 58071 58410 MAG: Candidatus Campbellbacteria bacterium isolate EsbW_18-Q3-R4-48_MAXAC.283_fly_man chromosome, complete genome blastn 1008 529 1 Bacteria Bacteria candidate phyla   Candidatus Campbelliibacteriota         Candidatus Campbellbacteria bacterium
26912803 26912803 PRJNA1148190_P_NODE_376542_length_291_cov_1.490826_g365369_i0 PRJNA1148190 376542 291 1.490826 4.33830366 Candidatus Campbellbacteria bacterium RIFOXYC2_FULL_35_25 1797582 Bacteria Bacteria 47 0.00173   NR OGD66845.1 1797582 g365369 i0 70 0.597938144329897 30 9 30.9 0 201 290 7 36 OGD66845.1 MAG: 30S ribosomal protein S2 [Candidatus Campbellbacteria bacterium RIFOXYC2_FULL_35_25] diamond 174 47 1 Bacteria Bacteria candidate phyla   Candidatus Campbelliibacteriota         Candidatus Campbellbacteria bacterium RIFOXYC2_FULL_35_25
27766245 27766245 PRJNA1148190_P_NODE_36164_length_1103_cov_2.668932_g26003_i0 PRJNA1148190 36164 1103 2.668932 29.43831996 Candidatus Campbellbacteria bacterium 2026716 Bacteria Bacteria 90.1 5.67e-16   NR QQR82459.1 2026716 g26003 i0 51.3 0.217588395285585 80 37 21.8 2 862 1101 13 90 QQR82459.1 MAG: hypothetical protein IPJ70_04255 [Candidatus Campbellbacteria bacterium] diamond 240 90.1 1 Bacteria Bacteria candidate phyla   Candidatus Campbelliibacteriota         Candidatus Campbellbacteria bacterium
27786291 27786291 PRJNA1148190_P_NODE_341004_length_304_cov_1.000000_g329831_i0 PRJNA1148190 341004 304 1 3.04 Bacteria 2 Bacteria Bacteria 121 8.769999999999998e-32   NR OGD69382.1 1797578 g329831 i0 56.7 4.82565789473684 97 42 95.7 0 291 1 104 200 OGD69382.1 MAG: hypothetical protein A3E89_00285 [Candidatus Campbellbacteria bacterium RIFCSPHIGHO2_12_FULL_35_10] diamond 1467 121 1 Bacteria Bacteria candidate phyla   Candidatus Campbelliibacteriota         Candidatus Campbellbacteria bacterium RIFCSPHIGHO2_12_FULL_35_10
28101686 28101686 PRJNA1148190_P_NODE_325765_length_309_cov_2.203390_g314592_i0 PRJNA1148190 325765 309 2.20339 6.8084751 Bacteria 2 Bacteria Bacteria 70.5 1.5e-11   NR MCR4275010.1 2026716 g314592 i0 48.7 1.44660194174757 78 40 75.7 0 3 236 836 913 MCR4275010.1 hypothetical protein [Candidatus Campbellbacteria bacterium] diamond 447 70.9 0.994358251057828 Bacteria Bacteria candidate phyla   Candidatus Campbelliibacteriota         Candidatus Campbellbacteria bacterium
29144044 29144044 PRJNA1148190_P_NODE_254529_length_341_cov_1.149254_g243359_i0 PRJNA1148190 254529 341 1.149254 3.91895614 Bacteria 2 Bacteria Bacteria 175 2.4100000000000002e-49   NR MAQ77474.1 2026716 g243359 i0 73.5 7.96187683284457 113 30 99.4 0 1 339 374 486 MAQ77474.1 translational GTPase TypA [Candidatus Campbellbacteria bacterium] diamond 2715 175 1 Bacteria Bacteria candidate phyla   Candidatus Campbelliibacteriota         Candidatus Campbellbacteria bacterium
29364996 29364996 PRJNA1148190_P_NODE_676329_length_246_cov_1.497110_g665156_i0 PRJNA1148190 676329 246 1.49711 3.6828906 Bacteria 2 Bacteria Bacteria 81.6 7.84e-16   NR QQR82439.1 2026716 g665156 i0 55.8 1.92682926829268 77 34 93.9 0 13 243 175 251 QQR82439.1 MAG: hypothetical protein IPJ70_04155 [Candidatus Campbellbacteria bacterium] diamond 474 81.6 1 Bacteria Bacteria candidate phyla   Candidatus Campbelliibacteriota         Candidatus Campbellbacteria bacterium
29711892 29711892 PRJNA1148190_P_NODE_793170_length_239_cov_2.355422_g781997_i0 PRJNA1148190 793170 239 2.355422 5.62945858 Bacteria 2 Bacteria Bacteria 148 2.93e-39   NR PIP87036.1 1974529 g781997 i0 93.7 26.7740585774059 79 5 99.2 0 1 237 414 492 PIP87036.1 MAG: excinuclease ABC subunit A [Candidatus Campbellbacteria bacterium CG22_combo_CG10-13_8_21_14_all_36_13] diamond 6399 149 0.993288590604027 Bacteria Bacteria candidate phyla   Candidatus Campbelliibacteriota         Candidatus Campbellbacteria bacterium CG22_combo_CG10-13_8_21_14_all_36_13
29743489 29743489 PRJNA1148190_P_NODE_496490_length_267_cov_1.587629_g485317_i0 PRJNA1148190 496490 267 1.587629 4.23896943 Bacteria 2 Bacteria Bacteria 104 5.19e-25   NR PIP87024.1 1974529 g485317 i0 57 16.561797752809 86 37 96.6 0 259 2 40 125 PIP87024.1 MAG: DNA-protecting protein DprA [Candidatus Campbellbacteria bacterium CG22_combo_CG10-13_8_21_14_all_36_13] diamond 4422 105 0.990476190476191 Bacteria Bacteria candidate phyla   Candidatus Campbelliibacteriota         Candidatus Campbellbacteria bacterium CG22_combo_CG10-13_8_21_14_all_36_13
29838357 29838357 PRJNA1148190_P_NODE_364391_length_295_cov_1.693694_g353218_i0 PRJNA1148190 364391 295 1.693694 4.9963973 Bacteria 2 Bacteria Bacteria 103 5.81e-24   NR QQR82467.1 2026716 g353218 i0 53.3 1.85084745762712 90 42 91.5 0 16 285 66 155 QQR82467.1 MAG: hypothetical protein IPJ70_04295 [Candidatus Campbellbacteria bacterium] diamond 546 103 1 Bacteria Bacteria candidate phyla   Candidatus Campbelliibacteriota         Candidatus Campbellbacteria bacterium
30956668 30956668 PRJNA1148190_P_NODE_79414_length_614_cov_6.336414_g68290_i0 PRJNA1148190 79414 614 6.336414 38.90558196 Candidatus Campbellbacteria bacterium 2026716 Bacteria Bacteria 59.3 5.45e-7   NR MCR4275066.1 2026716 g68290 i0 35 0.669381107491857 137 61 53.3 3 259 585 61 197 MCR4275066.1 hypothetical protein [Candidatus Campbellbacteria bacterium] diamond 411 59.3 1 Bacteria Bacteria candidate phyla   Candidatus Campbelliibacteriota         Candidatus Campbellbacteria bacterium
32347531 32347531 PRJNA1148190_P_NODE_328879_length_308_cov_1.706383_g317706_i0 PRJNA1148190 328879 308 1.706383 5.25565964 Candidatus Campbellbacteria bacterium CG22_combo_CG1 2026716 Bacteria Bacteria 160 7.46e-47   NR PIP87434.1 1974529 g317706 i0 78.4 0.993506493506494 102 22 99.4 0 2 307 79 180 PIP87434.1 MAG: hypothetical protein COW81_00165 [Candidatus Campbellbacteria bacterium CG22_combo_CG10-13_8_21_14_all_36_13] diamond 306 160 1 Bacteria Bacteria candidate phyla   Candidatus Campbelliibacteriota         Candidatus Campbellbacteria bacterium CG22_combo_CG10-13_8_21_14_all_36_13
32884056 32884056 PRJNA1148190_P_NODE_652460_length_248_cov_0.880000_g641287_i0 PRJNA1148190 652460 248 0.88 2.1824 Candidatus Campbellbacteria bacterium GW2 2026716 Bacteria Bacteria 60.8 4.76e-9   NR KKP74626.1 1618632 g641287 i0 43.2 1.95967741935484 81 37 98 4 247 5 71 142 KKP74626.1 MAG: Type IV pilin [Candidatus Campbellbacteria bacterium GW2011_GWD2_35_24] diamond 486 60.8 1 Bacteria Bacteria candidate phyla   Candidatus Campbelliibacteriota         Candidatus Campbellbacteria bacterium GW2011_GWD2_35_24

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;