RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1148190" and tax_clade = "Marine Group I"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Marine Group I · 2 ✖

bioproject 1

  • PRJNA1148190 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29723309 29723309 PRJNA1148190_P_NODE_337550_length_305_cov_1.327586_g326377_i0 PRJNA1148190 337550 305 1.327586 4.0491373 Marine Group I thaumarchaeote 2511932 Archaea Archaea 69.3 8.53e-12   NR NWJ43786.1 2511932 g326377 i0 60.9 2.0655737704918 69 25 67.9 2 303 97 45 111 NWJ43786.1 hypothetical protein [Marine Group I thaumarchaeote] diamond 630 69.3 1 Archaea Marine Group I Thermoproteati Nitrososphaerota         Marine Group I thaumarchaeote
31176555 31176555 PRJNA1148190_P_NODE_320755_length_311_cov_1.626050_g309582_i0 PRJNA1148190 320755 311 1.62605 5.0570155 Marine Group I thaumarchaeote 2511932 Archaea Archaea 48.1 1.83e-4   NR NWJ43962.1 2511932 g309582 i0 35.1 1.94855305466238 74 47 70.4 1 310 92 36 109 NWJ43962.1 hypothetical protein [Marine Group I thaumarchaeote] diamond 606 48.1 1 Archaea Marine Group I Thermoproteati Nitrososphaerota         Marine Group I thaumarchaeote

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;