RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA1145574" and tax_clade = "Duplodnaviria"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Duplodnaviria · 1 ✖

bioproject 1

  • PRJNA1145574 · 1 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30722865 30722865 PRJNA1145574_P_NODE_2234_length_550_cov_1.471698_g2052_i0 PRJNA1145574 2234 550 1.471698 8.094339 Demerecviridae 2731690 Viruses Viruses 103 3.48e-24   NR YP_009804592.1 2053625 g2052 i0 43 3.94909090909091 142 76 74.7 3 114 524 5 146 YP_009804592.1 HNH endonuclease [Salmonella phage SP3] diamond 2172 103 1 Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes   Demerecviridae Tequintavirus Tequintavirus SP3

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;