RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA1120060" and tax_clade = "Duplodnaviria"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Duplodnaviria · 1 ✖

bioproject 1

  • PRJNA1120060 · 1 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
21910103 21910103 PRJNA1120060_P_NODE_1125358_length_311_cov_2.714286_g1107423_i0 PRJNA1120060 1125358 311 2.714286 8.44142946 Percavirus felidgamma1 3050285 Viruses Viruses 63.9 1.34e-5   NTclustered gi|944325061|ref|NC_028099.1| 1452540 g1107423 i0 91.304 2.5048231511254 46 4 15 0 172 217 114566 114611 Felis catus gammaherpesvirus 1 isolate 31286, complete genome blastn 779 63.9 1 Viruses Duplodnaviria Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Percavirus Percavirus felidgamma1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;