viruses_fish_associated_curated: 531
This data as json
| rowid | contig_withLCA_withcluster | clusterLCA_curated | Category | contig_withLCA | shortcontigname | clusterLCA | clusterLCAcurated_contigcount | clusterLCAcurated_bioprojectcount | clusterLCAcurated_clustercount | shortclustername | cluster | clustersize | bioprojectsbycluster | bioproject | node | length | coverage | rel_abundance | taxname_lca_NTorNR | taxid_lca_NTorNR | taxoncategory_NTorNR | taxoncategorysimple_NTorNR | bits_NTorNR | evalue_NTorNR | viruscategory_NTorNR | viruscategorysimple_NTorNR | analysis_used | contig_name | lowcoverage_flag | target_title_NTorNR | target_NTorNR | taxid_NTorNR | gene_NTorNR | allele_NTorNR | pident_NTorNR | sumperc_cov_NTorNR | alnlen_NTorNR | mismatch_NTorNR | qcov_NTorNR | gapopen_NTorNR | qstart_NTorNR | qend_NTorNR | tstart_NTorNR | tend_NTorNR | sumalnlen_NTorNR | maxbits_NTorNR | bits_percmax_NTorNR | tax_superkingdom_NTorNR | tax_clade_NTorNR | tax_kingdom_NTorNR | tax_phylum_NTorNR | tax_class_NTorNR | tax_order_NTorNR | tax_family_NTorNR | tax_genus_NTorNR | tax_species_NTorNR | classification | taxname_lca_NTclustered | taxname_lca_NR | target_NTclustered | taxoncategory_NTclustered | taxoncategory_NR | taxoncategorysimple_NTclustered | taxoncategorysimple_NR | bits_NTclustered | bits_NR | evalue_NTclustered | evalue_NR |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 531 | PRJNA1011833_CONTIG_6090|Sprivivirus_cyprinus|CLUSTER1_Sprivivirus_cyprinus|1869|13 | Spring viraemia of carp virus | Known | PRJNA1011833_CONTIG_6090|Sprivivirus_cyprinus | PRJNA1011833_CONTIG_6090 | Sprivivirus cyprinus | 1839 | 13 | 4 | CLUSTER1_Sprivivirus_cyprinus|1869|13 | OP495631_1_Sprivivirus_cyprinus_isolate_SVCV_2022_complete_genome | 1869 | 13 | PRJNA1011833 | 6090 | 439 | 10.704545 | 46.99295255 | Sprivivirus cyprinus | 696863 | Viruses | Viruses | 778.0 | 0.0 | Sprivivirus cyprinus | Non-phage | NTclustered | PRJNA1011833_S_NODE_6090_length_439_cov_10.704545_g5677_i0 | Spring viraemia of carp virus isolate 566087-1 phosphoprotein (P) gene, partial cds; matrix (M) and glycoprotein (G) genes, complete cds; and RNA dependent RNA polymerase (L) gene, partial cds | gi|387273543|gb|JQ666283.1| | 696863 | g5677 | i0 | 98.633 | 47.3166287 | 439 | 6 | 100.0 | 0 | 1 | 439 | 396 | 834 | 20772 | 778.0 | 1.0 | Viruses | Riboviria | Orthornavirae | Negarnaviricota | Monjiviricetes | Mononegavirales | Rhabdoviridae | Sprivivirus | Sprivivirus cyprinus | Viruses;Riboviria;Orthornavirae;Negarnaviricota;Monjiviricetes;Mononegavirales;Rhabdoviridae;Sprivivirus;Spring viraemia of carp virus | Sprivivirus cyprinus | Sprivivirus cyprinus | gi|387273543|gb|JQ666283.1| | Viruses | Viruses | Viruses | Viruses | 778.0 | 308.0 | 0.0 | 1.0899999999999999e-104 |