viruses_fish_associated_curated: 4350
This data as json
| rowid | contig_withLCA_withcluster | clusterLCA_curated | Category | contig_withLCA | shortcontigname | clusterLCA | clusterLCAcurated_contigcount | clusterLCAcurated_bioprojectcount | clusterLCAcurated_clustercount | shortclustername | cluster | clustersize | bioprojectsbycluster | bioproject | node | length | coverage | rel_abundance | taxname_lca_NTorNR | taxid_lca_NTorNR | taxoncategory_NTorNR | taxoncategorysimple_NTorNR | bits_NTorNR | evalue_NTorNR | viruscategory_NTorNR | viruscategorysimple_NTorNR | analysis_used | contig_name | lowcoverage_flag | target_title_NTorNR | target_NTorNR | taxid_NTorNR | gene_NTorNR | allele_NTorNR | pident_NTorNR | sumperc_cov_NTorNR | alnlen_NTorNR | mismatch_NTorNR | qcov_NTorNR | gapopen_NTorNR | qstart_NTorNR | qend_NTorNR | tstart_NTorNR | tend_NTorNR | sumalnlen_NTorNR | maxbits_NTorNR | bits_percmax_NTorNR | tax_superkingdom_NTorNR | tax_clade_NTorNR | tax_kingdom_NTorNR | tax_phylum_NTorNR | tax_class_NTorNR | tax_order_NTorNR | tax_family_NTorNR | tax_genus_NTorNR | tax_species_NTorNR | classification | taxname_lca_NTclustered | taxname_lca_NR | target_NTclustered | taxoncategory_NTclustered | taxoncategory_NR | taxoncategorysimple_NTclustered | taxoncategorysimple_NR | bits_NTclustered | bits_NR | evalue_NTclustered | evalue_NR |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 4350 | PRJNA1011844_CONTIG_138730|Cyprivirus_A|CLUSTER1_Cyprivirus_A|1164|220 | Zebrafish picornavirus 1 | Known | PRJNA1011844_CONTIG_138730|Cyprivirus_A | PRJNA1011844_CONTIG_138730 | Cyprivirus A | 1161 | 220 | 1 | CLUSTER1_Cyprivirus_A|1164|220 | PRJNA561212_P_NODE_3_length_8346_cov_49.070712_g2_i0|Cyprivirus_A|NTclustered|0|NA | 1164 | 220 | PRJNA1011844 | 138730 | 259 | 1.38172 | 3.5786548 | Cyprivirus A | 2304617 | Viruses | Viruses | 322.0 | 1.6299999999999999e-83 | Cyprivirus A | Non-phage | NTclustered | PRJNA1011844_P_NODE_138730_length_259_cov_1.381720_g130152_i0 | Zebrafish picornavirus 1 isolate CZAR/ZfPV/2018/Utah/USA, complete genome | gi|1812398529|gb|MN524064.1| | 2563826 | g130152 | i0 | 90.535 | 2.822393822 | 243 | 23 | 94.0 | 0 | 17 | 259 | 5017 | 5259 | 731 | 322.0 | 1.0 | Viruses | Riboviria | Orthornavirae | Pisuviricota | Pisoniviricetes | Picornavirales | Picornaviridae | Cyprivirus A | Viruses;Riboviria;Orthornavirae;Pisuviricota;Pisoniviricetes;Picornavirales;Picornaviridae;Zebrafish picornavirus 1 | Cyprivirus A | Zebrafish picornavirus 1 | gi|1812398529|gb|MN524064.1| | Viruses | Viruses | Viruses | Viruses | 322.0 | 153.0 | 1.6299999999999999e-83 | 7.32e-41 |