viruses_fish_associated_curated: 144
This data as json
| rowid | contig_withLCA_withcluster | clusterLCA_curated | Category | contig_withLCA | shortcontigname | clusterLCA | clusterLCAcurated_contigcount | clusterLCAcurated_bioprojectcount | clusterLCAcurated_clustercount | shortclustername | cluster | clustersize | bioprojectsbycluster | bioproject | node | length | coverage | rel_abundance | taxname_lca_NTorNR | taxid_lca_NTorNR | taxoncategory_NTorNR | taxoncategorysimple_NTorNR | bits_NTorNR | evalue_NTorNR | viruscategory_NTorNR | viruscategorysimple_NTorNR | analysis_used | contig_name | lowcoverage_flag | target_title_NTorNR | target_NTorNR | taxid_NTorNR | gene_NTorNR | allele_NTorNR | pident_NTorNR | sumperc_cov_NTorNR | alnlen_NTorNR | mismatch_NTorNR | qcov_NTorNR | gapopen_NTorNR | qstart_NTorNR | qend_NTorNR | tstart_NTorNR | tend_NTorNR | sumalnlen_NTorNR | maxbits_NTorNR | bits_percmax_NTorNR | tax_superkingdom_NTorNR | tax_clade_NTorNR | tax_kingdom_NTorNR | tax_phylum_NTorNR | tax_class_NTorNR | tax_order_NTorNR | tax_family_NTorNR | tax_genus_NTorNR | tax_species_NTorNR | classification | taxname_lca_NTclustered | taxname_lca_NR | target_NTclustered | taxoncategory_NTclustered | taxoncategory_NR | taxoncategorysimple_NTclustered | taxoncategorysimple_NR | bits_NTclustered | bits_NR | evalue_NTclustered | evalue_NR |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 144 | PRJNA266803_CONTIG_1002|Sprivivirus_cyprinus|CLUSTER1_Sprivivirus_cyprinus|1869|13 | Spring viraemia of carp virus | Known | PRJNA266803_CONTIG_1002|Sprivivirus_cyprinus | PRJNA266803_CONTIG_1002 | Sprivivirus cyprinus | 1839 | 13 | 4 | CLUSTER1_Sprivivirus_cyprinus|1869|13 | OP495631_1_Sprivivirus_cyprinus_isolate_SVCV_2022_complete_genome | 1869 | 13 | PRJNA266803 | 1002 | 163 | 4.402985 | 7.17686555 | Sprivivirus cyprinus | 696863 | Viruses | Viruses | 302.0 | 1.22e-77 | Sprivivirus cyprinus | Non-phage | NTclustered | PRJNA266803_S_NODE_1002_length_163_cov_4.402985_g967_i0 | Sprivivirus cyprinus strain SVCV 19-012933 nucleocapsid protein (N), phosoprotein (P), matrix protein (M), glycoprotein (G), and polymerase protein (L) genes, complete cds | gi|2053424678|gb|MZ343157.1| | 696863 | g967 | i0 | 100.0 | 20.0 | 163 | 0 | 100.0 | 0 | 1 | 163 | 7708 | 7546 | 3260 | 302.0 | 1.0 | Viruses | Riboviria | Orthornavirae | Negarnaviricota | Monjiviricetes | Mononegavirales | Rhabdoviridae | Sprivivirus | Sprivivirus cyprinus | Viruses;Riboviria;Orthornavirae;Negarnaviricota;Monjiviricetes;Mononegavirales;Rhabdoviridae;Sprivivirus;Spring viraemia of carp virus | Sprivivirus cyprinus | Sprivivirus cyprinus | gi|2053424678|gb|MZ343157.1| | Viruses | Viruses | Viruses | Viruses | 302.0 | 108.0 | 1.22e-77 | 1.14e-25 |