viruses_fish_associated_curated: 10421
This data as json
| rowid | contig_withLCA_withcluster | clusterLCA_curated | Category | contig_withLCA | shortcontigname | clusterLCA | clusterLCAcurated_contigcount | clusterLCAcurated_bioprojectcount | clusterLCAcurated_clustercount | shortclustername | cluster | clustersize | bioprojectsbycluster | bioproject | node | length | coverage | rel_abundance | taxname_lca_NTorNR | taxid_lca_NTorNR | taxoncategory_NTorNR | taxoncategorysimple_NTorNR | bits_NTorNR | evalue_NTorNR | viruscategory_NTorNR | viruscategorysimple_NTorNR | analysis_used | contig_name | lowcoverage_flag | target_title_NTorNR | target_NTorNR | taxid_NTorNR | gene_NTorNR | allele_NTorNR | pident_NTorNR | sumperc_cov_NTorNR | alnlen_NTorNR | mismatch_NTorNR | qcov_NTorNR | gapopen_NTorNR | qstart_NTorNR | qend_NTorNR | tstart_NTorNR | tend_NTorNR | sumalnlen_NTorNR | maxbits_NTorNR | bits_percmax_NTorNR | tax_superkingdom_NTorNR | tax_clade_NTorNR | tax_kingdom_NTorNR | tax_phylum_NTorNR | tax_class_NTorNR | tax_order_NTorNR | tax_family_NTorNR | tax_genus_NTorNR | tax_species_NTorNR | classification | taxname_lca_NTclustered | taxname_lca_NR | target_NTclustered | taxoncategory_NTclustered | taxoncategory_NR | taxoncategorysimple_NTclustered | taxoncategorysimple_NR | bits_NTclustered | bits_NR | evalue_NTclustered | evalue_NR |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 10421 | PRJNA630162_CONTIG_20357|Flumine_Astrovirus_3|CLUSTER3_Flumine_Astrovirus_3|1|1 | Flumine Astrovirus 3 | Endogenous or not fish-associated | PRJNA630162_CONTIG_20357|Flumine_Astrovirus_3 | PRJNA630162_CONTIG_20357 | Flumine Astrovirus 3 | 6 | 2 | 5 | CLUSTER3_Flumine_Astrovirus_3|1|1 | PRJNA630162_P_NODE_20357_length_410_cov_2.520776_g18842_i0|Flumine_Astrovirus_3|NR|3.47e-09|NA | 1 | 1 | PRJNA630162 | 20357 | 410 | 2.520776 | 10.3351816 | Flumine Astrovirus 3 | 2940955 | Viruses | Viruses | 65.1 | 3.47e-09 | Flumine Astrovirus 3 | Non-phage | NR | PRJNA630162_P_NODE_20357_length_410_cov_2.520776_g18842_i0 | UQB76172.1 RNA-dependent RNA polymerase, partial [Flumine Astrovirus 3] | UQB76172.1 | 2940955 | g18842 | i0 | 34.1 | 1.324390244 | 91 | 60 | 66.6 | 0 | 278 | 6 | 60 | 150 | 543 | 65.1 | 1.0 | Viruses | Riboviria | Orthornavirae | Pisuviricota | Stelpaviricetes | Stellavirales | Astroviridae | Flumine Astrovirus 3 | Viruses;Riboviria;Orthornavirae;Pisuviricota;Stelpaviricetes;Stellavirales;Astroviridae;Flumine Astrovirus 3 | Flumine Astrovirus 3 | Viruses | Viruses | 65.1 | 3.47e-09 |