viruses_fish_associated_curated: 10416
This data as json
| rowid | contig_withLCA_withcluster | clusterLCA_curated | Category | contig_withLCA | shortcontigname | clusterLCA | clusterLCAcurated_contigcount | clusterLCAcurated_bioprojectcount | clusterLCAcurated_clustercount | shortclustername | cluster | clustersize | bioprojectsbycluster | bioproject | node | length | coverage | rel_abundance | taxname_lca_NTorNR | taxid_lca_NTorNR | taxoncategory_NTorNR | taxoncategorysimple_NTorNR | bits_NTorNR | evalue_NTorNR | viruscategory_NTorNR | viruscategorysimple_NTorNR | analysis_used | contig_name | lowcoverage_flag | target_title_NTorNR | target_NTorNR | taxid_NTorNR | gene_NTorNR | allele_NTorNR | pident_NTorNR | sumperc_cov_NTorNR | alnlen_NTorNR | mismatch_NTorNR | qcov_NTorNR | gapopen_NTorNR | qstart_NTorNR | qend_NTorNR | tstart_NTorNR | tend_NTorNR | sumalnlen_NTorNR | maxbits_NTorNR | bits_percmax_NTorNR | tax_superkingdom_NTorNR | tax_clade_NTorNR | tax_kingdom_NTorNR | tax_phylum_NTorNR | tax_class_NTorNR | tax_order_NTorNR | tax_family_NTorNR | tax_genus_NTorNR | tax_species_NTorNR | classification | taxname_lca_NTclustered | taxname_lca_NR | target_NTclustered | taxoncategory_NTclustered | taxoncategory_NR | taxoncategorysimple_NTclustered | taxoncategorysimple_NR | bits_NTclustered | bits_NR | evalue_NTclustered | evalue_NR |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 10416 | PRJNA1002260_CONTIG_19353|Atlantic_salmon_calicivirus|CLUSTER1_Atlantic_salmon_calicivirus|1|1 | Zebrafish systemic calicivirus | Novel | PRJNA1002260_CONTIG_19353|Atlantic_salmon_calicivirus | PRJNA1002260_CONTIG_19353 | Atlantic salmon calicivirus | 1 | 1 | 1 | CLUSTER1_Atlantic_salmon_calicivirus|1|1 | PRJNA1002260_P_NODE_19353_length_635_cov_5.985765_g18404_i0|Atlantic_salmon_calicivirus|NR|8.45e-113|NA | 1 | 1 | PRJNA1002260 | 19353 | 635 | 5.985765 | 38.00960775 | Atlantic salmon calicivirus | 1489836 | Viruses | Viruses | 365.0 | 8.45e-113 | Atlantic salmon calicivirus | Non-phage | NR | PRJNA1002260_P_NODE_19353_length_635_cov_5.985765_g18404_i0 | AHX24377.1 polyprotein [Atlantic salmon calicivirus] | AHX24377.1 | 1489836 | g18404 | i0 | 82.9 | 1.993700787 | 211 | 36 | 99.7 | 0 | 635 | 3 | 374 | 584 | 1266 | 365.0 | 1.0 | Viruses | Riboviria | Orthornavirae | Pisuviricota | Pisoniviricetes | Picornavirales | Caliciviridae | Salovirus | Salovirus nordlandense | Viruses;Riboviria;Orthornavirae;Pisuviricota;Pisoniviricetes;Picornavirales;Caliciviridae;Salovirus;Zebrafish systemic calicivirus | Atlantic salmon calicivirus | Viruses | Viruses | 365.0 | 8.45e-113 |