viruses_fish_associated_curated: 10284
This data as json
| rowid | contig_withLCA_withcluster | clusterLCA_curated | Category | contig_withLCA | shortcontigname | clusterLCA | clusterLCAcurated_contigcount | clusterLCAcurated_bioprojectcount | clusterLCAcurated_clustercount | shortclustername | cluster | clustersize | bioprojectsbycluster | bioproject | node | length | coverage | rel_abundance | taxname_lca_NTorNR | taxid_lca_NTorNR | taxoncategory_NTorNR | taxoncategorysimple_NTorNR | bits_NTorNR | evalue_NTorNR | viruscategory_NTorNR | viruscategorysimple_NTorNR | analysis_used | contig_name | lowcoverage_flag | target_title_NTorNR | target_NTorNR | taxid_NTorNR | gene_NTorNR | allele_NTorNR | pident_NTorNR | sumperc_cov_NTorNR | alnlen_NTorNR | mismatch_NTorNR | qcov_NTorNR | gapopen_NTorNR | qstart_NTorNR | qend_NTorNR | tstart_NTorNR | tend_NTorNR | sumalnlen_NTorNR | maxbits_NTorNR | bits_percmax_NTorNR | tax_superkingdom_NTorNR | tax_clade_NTorNR | tax_kingdom_NTorNR | tax_phylum_NTorNR | tax_class_NTorNR | tax_order_NTorNR | tax_family_NTorNR | tax_genus_NTorNR | tax_species_NTorNR | classification | taxname_lca_NTclustered | taxname_lca_NR | target_NTclustered | taxoncategory_NTclustered | taxoncategory_NR | taxoncategorysimple_NTclustered | taxoncategorysimple_NR | bits_NTclustered | bits_NR | evalue_NTclustered | evalue_NR |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 10284 | PRJNA1108487_CONTIG_17|Betanodavirus_epinepheli|CLUSTER1_Betanodavirus_epinepheli|1|1 | Redspotted grouper nervous necrosis virus | Known | PRJNA1108487_CONTIG_17|Betanodavirus_epinepheli | PRJNA1108487_CONTIG_17 | Betanodavirus epinepheli | 4 | 2 | 3 | CLUSTER1_Betanodavirus_epinepheli|1|1 | PRJNA1108487_P_NODE_17_length_3045_cov_11.845559_g13_i0|Betanodavirus_epinepheli|NTclustered|0|NA | 1 | 1 | PRJNA1108487 | 17 | 3045 | 11.845559 | 360.6972716 | Betanodavirus epinepheli | 3427237 | Viruses | Viruses | 5502.0 | 0.0 | Betanodavirus epinepheli | Non-phage | NTclustered | PRJNA1108487_P_NODE_17_length_3045_cov_11.845559_g13_i0 | Redspotted grouper nervous necrosis virus isolate China 1 RNA-dependent RNA polymerase gene, complete cds | gi|156076357|gb|EF558368.1| | 43763 | g13 | i0 | 99.278 | 99.07192118 | 3045 | 22 | 100.0 | 0 | 1 | 3045 | 3057 | 13 | 301674 | 5502.0 | 1.0 | Viruses | Riboviria | Orthornavirae | Kitrinoviricota | Magsaviricetes | Nodamuvirales | Nodaviridae | Betanodavirus | Betanodavirus epinepheli | Viruses;Riboviria;Orthornavirae;Kitrinoviricota;Magsaviricetes;Nodamuvirales;Nodaviridae;Betanodavirus;Redspotted grouper nervous necrosis virus | Betanodavirus epinepheli | Redspotted grouper nervous necrosis virus | gi|156076357|gb|EF558368.1| | Viruses | Viruses | Viruses | Viruses | 5502.0 | 1961.0 | 0.0 | 0.0 |