viruses_fish_associated_curated: 10265
This data as json
| rowid | contig_withLCA_withcluster | clusterLCA_curated | Category | contig_withLCA | shortcontigname | clusterLCA | clusterLCAcurated_contigcount | clusterLCAcurated_bioprojectcount | clusterLCAcurated_clustercount | shortclustername | cluster | clustersize | bioprojectsbycluster | bioproject | node | length | coverage | rel_abundance | taxname_lca_NTorNR | taxid_lca_NTorNR | taxoncategory_NTorNR | taxoncategorysimple_NTorNR | bits_NTorNR | evalue_NTorNR | viruscategory_NTorNR | viruscategorysimple_NTorNR | analysis_used | contig_name | lowcoverage_flag | target_title_NTorNR | target_NTorNR | taxid_NTorNR | gene_NTorNR | allele_NTorNR | pident_NTorNR | sumperc_cov_NTorNR | alnlen_NTorNR | mismatch_NTorNR | qcov_NTorNR | gapopen_NTorNR | qstart_NTorNR | qend_NTorNR | tstart_NTorNR | tend_NTorNR | sumalnlen_NTorNR | maxbits_NTorNR | bits_percmax_NTorNR | tax_superkingdom_NTorNR | tax_clade_NTorNR | tax_kingdom_NTorNR | tax_phylum_NTorNR | tax_class_NTorNR | tax_order_NTorNR | tax_family_NTorNR | tax_genus_NTorNR | tax_species_NTorNR | classification | taxname_lca_NTclustered | taxname_lca_NR | target_NTclustered | taxoncategory_NTclustered | taxoncategory_NR | taxoncategorysimple_NTclustered | taxoncategorysimple_NR | bits_NTclustered | bits_NR | evalue_NTclustered | evalue_NR |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 10265 | PRJEB64798_CONTIG_27348|Flumine_Astrovirus_3|CLUSTER1_Flumine_Astrovirus_3|2|1 | Flumine Astrovirus 3 | Endogenous or not fish-associated | PRJEB64798_CONTIG_27348|Flumine_Astrovirus_3 | PRJEB64798_CONTIG_27348 | Flumine Astrovirus 3 | 6 | 2 | 5 | CLUSTER1_Flumine_Astrovirus_3|2|1 | PRJEB64798_P_NODE_6282_length_781_cov_14.681694_g5068_i0|Flumine_Astrovirus_3|NR|1.32e-19|NA | 2 | 1 | PRJEB64798 | 27348 | 376 | 10.954128 | 41.18752128 | Flumine Astrovirus 3 | 2940955 | Viruses | Viruses | 106.0 | 5.74e-24 | Flumine Astrovirus 3 | Non-phage | NR | PRJEB64798_P_NODE_27348_length_376_cov_10.954128_g25593_i0 | UQB76172.1 RNA-dependent RNA polymerase, partial [Flumine Astrovirus 3] | UQB76172.1 | 2940955 | g25593 | i0 | 43.8 | 0.965425532 | 121 | 66 | 95.7 | 2 | 363 | 4 | 119 | 238 | 363 | 106.0 | 1.0 | Viruses | Riboviria | Orthornavirae | Pisuviricota | Stelpaviricetes | Stellavirales | Astroviridae | Flumine Astrovirus 3 | Viruses;Riboviria;Orthornavirae;Pisuviricota;Stelpaviricetes;Stellavirales;Astroviridae;Flumine Astrovirus 3 | Flumine Astrovirus 3 | Viruses | Viruses | 106.0 | 5.74e-24 |