viruses_fish_associated_curated: 10257
This data as json
| rowid | contig_withLCA_withcluster | clusterLCA_curated | Category | contig_withLCA | shortcontigname | clusterLCA | clusterLCAcurated_contigcount | clusterLCAcurated_bioprojectcount | clusterLCAcurated_clustercount | shortclustername | cluster | clustersize | bioprojectsbycluster | bioproject | node | length | coverage | rel_abundance | taxname_lca_NTorNR | taxid_lca_NTorNR | taxoncategory_NTorNR | taxoncategorysimple_NTorNR | bits_NTorNR | evalue_NTorNR | viruscategory_NTorNR | viruscategorysimple_NTorNR | analysis_used | contig_name | lowcoverage_flag | target_title_NTorNR | target_NTorNR | taxid_NTorNR | gene_NTorNR | allele_NTorNR | pident_NTorNR | sumperc_cov_NTorNR | alnlen_NTorNR | mismatch_NTorNR | qcov_NTorNR | gapopen_NTorNR | qstart_NTorNR | qend_NTorNR | tstart_NTorNR | tend_NTorNR | sumalnlen_NTorNR | maxbits_NTorNR | bits_percmax_NTorNR | tax_superkingdom_NTorNR | tax_clade_NTorNR | tax_kingdom_NTorNR | tax_phylum_NTorNR | tax_class_NTorNR | tax_order_NTorNR | tax_family_NTorNR | tax_genus_NTorNR | tax_species_NTorNR | classification | taxname_lca_NTclustered | taxname_lca_NR | target_NTclustered | taxoncategory_NTclustered | taxoncategory_NR | taxoncategorysimple_NTclustered | taxoncategorysimple_NR | bits_NTclustered | bits_NR | evalue_NTclustered | evalue_NR |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 10257 | PRJNA698005_CONTIG_10725|Aquareovirus_ctenopharyngodontis|CLUSTER8_Aquareovirus_ctenopharyngodontis|2|1 | Grass carp reovirus | Known | PRJNA698005_CONTIG_10725|Aquareovirus_ctenopharyngodontis | PRJNA698005_CONTIG_10725 | Aquareovirus ctenopharyngodontis | 14 | 1 | 8 | CLUSTER8_Aquareovirus_ctenopharyngodontis|2|1 | HQ231198_1_Grass_carp_reovirus_strain_GCRV_GD108_segment_L1_complete_sequence | 2 | 1 | PRJNA698005 | 10725 | 282 | 0.942584 | 2.65808688 | Aquareovirus ctenopharyngodontis | 185782 | Viruses | Viruses | 505.0 | 1.6599999999999998e-138 | Aquareovirus ctenopharyngodontis | Non-phage | NTclustered | PRJNA698005_S_NODE_10725_length_282_cov_0.942584_g10327_i0 | Grass carp reovirus strain GCRV-GD108 segment L1, complete sequence | gi|315112489|gb|HQ231198.1| | 128987 | g10327 | i0 | 98.936 | 13.0 | 282 | 3 | 100.0 | 0 | 1 | 282 | 638 | 357 | 3666 | 505.0 | 1.0 | Viruses | Riboviria | Orthornavirae | Duplornaviricota | Resentoviricetes | Reovirales | Spinareoviridae | Aquareovirus | Aquareovirus ctenopharyngodontis | Viruses;Riboviria;Orthornavirae;Duplornaviricota;Resentoviricetes;Reovirales;Spinareoviridae;Aquareovirus;Grass carp reovirus | Aquareovirus ctenopharyngodontis | Grass carp reovirus | gi|315112489|gb|HQ231198.1| | Viruses | Viruses | Viruses | Viruses | 505.0 | 193.0 | 1.6599999999999998e-138 | 7.089999999999999e-55 |