viruses_fish_associated_curated: 10240
This data as json
| rowid | contig_withLCA_withcluster | clusterLCA_curated | Category | contig_withLCA | shortcontigname | clusterLCA | clusterLCAcurated_contigcount | clusterLCAcurated_bioprojectcount | clusterLCAcurated_clustercount | shortclustername | cluster | clustersize | bioprojectsbycluster | bioproject | node | length | coverage | rel_abundance | taxname_lca_NTorNR | taxid_lca_NTorNR | taxoncategory_NTorNR | taxoncategorysimple_NTorNR | bits_NTorNR | evalue_NTorNR | viruscategory_NTorNR | viruscategorysimple_NTorNR | analysis_used | contig_name | lowcoverage_flag | target_title_NTorNR | target_NTorNR | taxid_NTorNR | gene_NTorNR | allele_NTorNR | pident_NTorNR | sumperc_cov_NTorNR | alnlen_NTorNR | mismatch_NTorNR | qcov_NTorNR | gapopen_NTorNR | qstart_NTorNR | qend_NTorNR | tstart_NTorNR | tend_NTorNR | sumalnlen_NTorNR | maxbits_NTorNR | bits_percmax_NTorNR | tax_superkingdom_NTorNR | tax_clade_NTorNR | tax_kingdom_NTorNR | tax_phylum_NTorNR | tax_class_NTorNR | tax_order_NTorNR | tax_family_NTorNR | tax_genus_NTorNR | tax_species_NTorNR | classification | taxname_lca_NTclustered | taxname_lca_NR | target_NTclustered | taxoncategory_NTclustered | taxoncategory_NR | taxoncategorysimple_NTclustered | taxoncategorysimple_NR | bits_NTclustered | bits_NR | evalue_NTclustered | evalue_NR |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 10240 | PRJNA939369_CONTIG_1544|Deltainfluenzavirus|CLUSTER7_Deltainfluenzavirus|2|1 | Deltainfluenzavirus | Endogenous or not fish-associated | PRJNA939369_CONTIG_1544|Deltainfluenzavirus | PRJNA939369_CONTIG_1544 | Deltainfluenzavirus | 7 | 1 | 7 | CLUSTER7_Deltainfluenzavirus|2|1 | NC_036621_1_Influenza_D_virus_D_swine_Oklahoma_1334_2011_segment_7_nonstructural_protein_2_NS2_and_nonstructural_protein_1_NS1_genes_complete_cds | 2 | 1 | PRJNA939369 | 1544 | 862 | 34.152091 | 294.3910244 | Deltainfluenzavirus | 1511083 | Viruses | Viruses | 1580.0 | 0.0 | Deltainfluenzavirus | Non-phage | NTclustered | PRJNA939369_S_NODE_1544_length_862_cov_34.152091_g1198_i0 | Influenza D virus (D/swine/Oklahoma/1334/2011) segment 7 nonstructural protein 2 (NS2) and nonstructural protein 1 (NS1) genes, complete cds | gi|1328406502|ref|NC_036621.1| | 1173138 | g1198 | i0 | 99.768 | 99.17865429 | 861 | 2 | 99.0 | 0 | 1 | 861 | 861 | 1 | 85492 | 1580.0 | 1.0 | Viruses | Riboviria | Orthornavirae | Negarnaviricota | Insthoviricetes | Articulavirales | Orthomyxoviridae | Deltainfluenzavirus | Deltainfluenzavirus influenzae | Viruses;Riboviria;Orthornavirae;Negarnaviricota;Insthoviricetes;Articulavirales;Orthomyxoviridae;Deltainfluenzavirus | Deltainfluenzavirus | Phaeobacter inhibens | gi|1328406502|ref|NC_036621.1| | Viruses | Bacteria | Viruses | Bacteria | 1580.0 | 491.0 | 0.0 | 1.31e-174 |