viruses_fish_associated_curated: 10196
This data as json
| rowid | contig_withLCA_withcluster | clusterLCA_curated | Category | contig_withLCA | shortcontigname | clusterLCA | clusterLCAcurated_contigcount | clusterLCAcurated_bioprojectcount | clusterLCAcurated_clustercount | shortclustername | cluster | clustersize | bioprojectsbycluster | bioproject | node | length | coverage | rel_abundance | taxname_lca_NTorNR | taxid_lca_NTorNR | taxoncategory_NTorNR | taxoncategorysimple_NTorNR | bits_NTorNR | evalue_NTorNR | viruscategory_NTorNR | viruscategorysimple_NTorNR | analysis_used | contig_name | lowcoverage_flag | target_title_NTorNR | target_NTorNR | taxid_NTorNR | gene_NTorNR | allele_NTorNR | pident_NTorNR | sumperc_cov_NTorNR | alnlen_NTorNR | mismatch_NTorNR | qcov_NTorNR | gapopen_NTorNR | qstart_NTorNR | qend_NTorNR | tstart_NTorNR | tend_NTorNR | sumalnlen_NTorNR | maxbits_NTorNR | bits_percmax_NTorNR | tax_superkingdom_NTorNR | tax_clade_NTorNR | tax_kingdom_NTorNR | tax_phylum_NTorNR | tax_class_NTorNR | tax_order_NTorNR | tax_family_NTorNR | tax_genus_NTorNR | tax_species_NTorNR | classification | taxname_lca_NTclustered | taxname_lca_NR | target_NTclustered | taxoncategory_NTclustered | taxoncategory_NR | taxoncategorysimple_NTclustered | taxoncategorysimple_NR | bits_NTclustered | bits_NR | evalue_NTclustered | evalue_NR |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 10196 | PRJNA698005_CONTIG_13163|Aquareovirus_ctenopharyngodontis|CLUSTER3_Aquareovirus_ctenopharyngodontis|4|1 | Grass carp reovirus | Known | PRJNA698005_CONTIG_13163|Aquareovirus_ctenopharyngodontis | PRJNA698005_CONTIG_13163 | Aquareovirus ctenopharyngodontis | 14 | 1 | 8 | CLUSTER3_Aquareovirus_ctenopharyngodontis|4|1 | KF712485_1_Grass_carp_reovirus_isolate_109_segment_11_complete_sequence | 4 | 1 | PRJNA698005 | 13163 | 258 | 3.145946 | 8.11654068 | Aquareovirus ctenopharyngodontis | 185782 | Viruses | Viruses | 449.0 | 7.13e-122 | Aquareovirus ctenopharyngodontis | Non-phage | NTclustered | PRJNA698005_S_NODE_13163_length_258_cov_3.145946_g12765_i0 | Grass carp reovirus isolate 109 segment 11, complete sequence | gi|568261607|gb|KF712485.1| | 128987 | g12765 | i0 | 98.062 | 12.0 | 258 | 5 | 100.0 | 0 | 1 | 258 | 408 | 151 | 3096 | 449.0 | 1.0 | Viruses | Riboviria | Orthornavirae | Duplornaviricota | Resentoviricetes | Reovirales | Spinareoviridae | Aquareovirus | Aquareovirus ctenopharyngodontis | Viruses;Riboviria;Orthornavirae;Duplornaviricota;Resentoviricetes;Reovirales;Spinareoviridae;Aquareovirus;Grass carp reovirus | Aquareovirus ctenopharyngodontis | Grass carp reovirus | gi|568261607|gb|KF712485.1| | Viruses | Viruses | Viruses | Viruses | 449.0 | 187.0 | 7.13e-122 | 3.3600000000000004e-57 |