viruses_fish_associated_curated: 10195
This data as json
| rowid | contig_withLCA_withcluster | clusterLCA_curated | Category | contig_withLCA | shortcontigname | clusterLCA | clusterLCAcurated_contigcount | clusterLCAcurated_bioprojectcount | clusterLCAcurated_clustercount | shortclustername | cluster | clustersize | bioprojectsbycluster | bioproject | node | length | coverage | rel_abundance | taxname_lca_NTorNR | taxid_lca_NTorNR | taxoncategory_NTorNR | taxoncategorysimple_NTorNR | bits_NTorNR | evalue_NTorNR | viruscategory_NTorNR | viruscategorysimple_NTorNR | analysis_used | contig_name | lowcoverage_flag | target_title_NTorNR | target_NTorNR | taxid_NTorNR | gene_NTorNR | allele_NTorNR | pident_NTorNR | sumperc_cov_NTorNR | alnlen_NTorNR | mismatch_NTorNR | qcov_NTorNR | gapopen_NTorNR | qstart_NTorNR | qend_NTorNR | tstart_NTorNR | tend_NTorNR | sumalnlen_NTorNR | maxbits_NTorNR | bits_percmax_NTorNR | tax_superkingdom_NTorNR | tax_clade_NTorNR | tax_kingdom_NTorNR | tax_phylum_NTorNR | tax_class_NTorNR | tax_order_NTorNR | tax_family_NTorNR | tax_genus_NTorNR | tax_species_NTorNR | classification | taxname_lca_NTclustered | taxname_lca_NR | target_NTclustered | taxoncategory_NTclustered | taxoncategory_NR | taxoncategorysimple_NTclustered | taxoncategorysimple_NR | bits_NTclustered | bits_NR | evalue_NTclustered | evalue_NR |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 10195 | PRJNA698005_CONTIG_12673|Aquareovirus_ctenopharyngodontis|CLUSTER5_Aquareovirus_ctenopharyngodontis|4|1 | Grass carp reovirus | Known | PRJNA698005_CONTIG_12673|Aquareovirus_ctenopharyngodontis | PRJNA698005_CONTIG_12673 | Aquareovirus ctenopharyngodontis | 14 | 1 | 8 | CLUSTER5_Aquareovirus_ctenopharyngodontis|4|1 | GU350742_1_Grass_carp_reovirus_strain_HZ08_segment_3_complete_sequence | 4 | 1 | PRJNA698005 | 12673 | 263 | 1.215789 | 3.19752507 | Aquareovirus ctenopharyngodontis | 185782 | Viruses | Viruses | 481.0 | 2.58e-131 | Aquareovirus ctenopharyngodontis | Non-phage | NTclustered | PRJNA698005_S_NODE_12673_length_263_cov_1.215789_g12275_i0 | Grass carp reovirus strain GCRV-DY197 segment 3, complete sequence | gi|2664538876|gb|PP196475.1| | 128987 | g12275 | i0 | 99.62 | 13.95057034 | 263 | 1 | 100.0 | 0 | 1 | 263 | 1822 | 2084 | 3669 | 481.0 | 1.0 | Viruses | Riboviria | Orthornavirae | Duplornaviricota | Resentoviricetes | Reovirales | Spinareoviridae | Aquareovirus | Aquareovirus ctenopharyngodontis | Viruses;Riboviria;Orthornavirae;Duplornaviricota;Resentoviricetes;Reovirales;Spinareoviridae;Aquareovirus;Grass carp reovirus | Aquareovirus ctenopharyngodontis | Grass carp reovirus | gi|2664538876|gb|PP196475.1| | Viruses | Viruses | Viruses | Viruses | 481.0 | 187.0 | 2.58e-131 | 6.11e-58 |