viruses_fish_associated_curated: 10155
This data as json
| rowid | contig_withLCA_withcluster | clusterLCA_curated | Category | contig_withLCA | shortcontigname | clusterLCA | clusterLCAcurated_contigcount | clusterLCAcurated_bioprojectcount | clusterLCAcurated_clustercount | shortclustername | cluster | clustersize | bioprojectsbycluster | bioproject | node | length | coverage | rel_abundance | taxname_lca_NTorNR | taxid_lca_NTorNR | taxoncategory_NTorNR | taxoncategorysimple_NTorNR | bits_NTorNR | evalue_NTorNR | viruscategory_NTorNR | viruscategorysimple_NTorNR | analysis_used | contig_name | lowcoverage_flag | target_title_NTorNR | target_NTorNR | taxid_NTorNR | gene_NTorNR | allele_NTorNR | pident_NTorNR | sumperc_cov_NTorNR | alnlen_NTorNR | mismatch_NTorNR | qcov_NTorNR | gapopen_NTorNR | qstart_NTorNR | qend_NTorNR | tstart_NTorNR | tend_NTorNR | sumalnlen_NTorNR | maxbits_NTorNR | bits_percmax_NTorNR | tax_superkingdom_NTorNR | tax_clade_NTorNR | tax_kingdom_NTorNR | tax_phylum_NTorNR | tax_class_NTorNR | tax_order_NTorNR | tax_family_NTorNR | tax_genus_NTorNR | tax_species_NTorNR | classification | taxname_lca_NTclustered | taxname_lca_NR | target_NTclustered | taxoncategory_NTclustered | taxoncategory_NR | taxoncategorysimple_NTclustered | taxoncategorysimple_NR | bits_NTclustered | bits_NR | evalue_NTclustered | evalue_NR |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 10155 | PRJNA698005_CONTIG_2972|Aquareovirus_ctenopharyngodontis|CLUSTER1_Aquareovirus_ctenopharyngodontis|6|1 | Grass carp reovirus | Known | PRJNA698005_CONTIG_2972|Aquareovirus_ctenopharyngodontis | PRJNA698005_CONTIG_2972 | Aquareovirus ctenopharyngodontis | 14 | 1 | 8 | CLUSTER1_Aquareovirus_ctenopharyngodontis|6|1 | HQ231201_1_Grass_carp_reovirus_strain_GCRV_GD108_segment_M4_complete_sequence | 6 | 1 | PRJNA698005 | 2972 | 504 | 1.921114 | 9.68241456 | Aquareovirus ctenopharyngodontis | 185782 | Viruses | Viruses | 898.0 | 0.0 | Aquareovirus ctenopharyngodontis | Non-phage | NTclustered | PRJNA698005_S_NODE_2972_length_504_cov_1.921114_g2576_i0 | Grass carp reovirus isolate 109 segment 4, complete sequence | gi|568261593|gb|KF712478.1| | 128987 | g2576 | i0 | 99.197 | 12.84722222 | 498 | 4 | 99.0 | 0 | 1 | 498 | 547 | 50 | 6475 | 898.0 | 1.0 | Viruses | Riboviria | Orthornavirae | Duplornaviricota | Resentoviricetes | Reovirales | Spinareoviridae | Aquareovirus | Aquareovirus ctenopharyngodontis | Viruses;Riboviria;Orthornavirae;Duplornaviricota;Resentoviricetes;Reovirales;Spinareoviridae;Aquareovirus;Grass carp reovirus | Aquareovirus ctenopharyngodontis | Grass carp reovirus | gi|568261593|gb|KF712478.1| | Viruses | Viruses | Viruses | Viruses | 898.0 | 321.0 | 0.0 | 4.0900000000000004e-103 |