viruses_fish_associated_curated: 10122
This data as json
| rowid | contig_withLCA_withcluster | clusterLCA_curated | Category | contig_withLCA | shortcontigname | clusterLCA | clusterLCAcurated_contigcount | clusterLCAcurated_bioprojectcount | clusterLCAcurated_clustercount | shortclustername | cluster | clustersize | bioprojectsbycluster | bioproject | node | length | coverage | rel_abundance | taxname_lca_NTorNR | taxid_lca_NTorNR | taxoncategory_NTorNR | taxoncategorysimple_NTorNR | bits_NTorNR | evalue_NTorNR | viruscategory_NTorNR | viruscategorysimple_NTorNR | analysis_used | contig_name | lowcoverage_flag | target_title_NTorNR | target_NTorNR | taxid_NTorNR | gene_NTorNR | allele_NTorNR | pident_NTorNR | sumperc_cov_NTorNR | alnlen_NTorNR | mismatch_NTorNR | qcov_NTorNR | gapopen_NTorNR | qstart_NTorNR | qend_NTorNR | tstart_NTorNR | tend_NTorNR | sumalnlen_NTorNR | maxbits_NTorNR | bits_percmax_NTorNR | tax_superkingdom_NTorNR | tax_clade_NTorNR | tax_kingdom_NTorNR | tax_phylum_NTorNR | tax_class_NTorNR | tax_order_NTorNR | tax_family_NTorNR | tax_genus_NTorNR | tax_species_NTorNR | classification | taxname_lca_NTclustered | taxname_lca_NR | target_NTclustered | taxoncategory_NTclustered | taxoncategory_NR | taxoncategorysimple_NTclustered | taxoncategorysimple_NR | bits_NTclustered | bits_NR | evalue_NTclustered | evalue_NR |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 10122 | PRJNA974396_CONTIG_5013|Isavirus|CLUSTER1_Isavirus_salaris|7|1 | Infectious Salmon Anemia Virus | Known | PRJNA974396_CONTIG_5013|Isavirus | PRJNA974396_CONTIG_5013 | Isavirus salaris | 19 | 1 | 8 | CLUSTER1_Isavirus_salaris|7|1 | MN885648_1_Isavirus_salaris_isolate_ISAV_752_segment_2_complete_sequence | 7 | 1 | PRJNA974396 | 5013 | 386 | 6.740525 | 26.0184265 | Isavirus | 324913 | Viruses | Viruses | 708.0 | 0.0 | Isavirus | Non-phage | NTclustered | PRJNA974396_S_NODE_5013_length_386_cov_6.740525_g4853_i0 | Infectious salmon anemia virus segment 2 isolate Gullesfjord/94 polymerase PB1 mRNA, partial cds | gi|8102003|gb|AF262396.1|AF262396 | 55987 | g4853 | i0 | 99.741 | 46.75647668 | 386 | 1 | 100.0 | 0 | 1 | 386 | 158 | 543 | 18048 | 708.0 | 1.0 | Viruses | Riboviria | Orthornavirae | Negarnaviricota | Insthoviricetes | Articulavirales | Orthomyxoviridae | Isavirus | Isavirus salaris | Viruses;Riboviria;Orthornavirae;Negarnaviricota;Insthoviricetes;Articulavirales;Orthomyxoviridae;Isavirus;Infectious Salmon Anemia Virus | Isavirus | Isavirus | gi|8102003|gb|AF262396.1|AF262396 | Viruses | Viruses | Viruses | Viruses | 708.0 | 263.0 | 0.0 | 2.06e-86 |