viruses_fish_associated_curated: 10071
This data as json
| rowid | contig_withLCA_withcluster | clusterLCA_curated | Category | contig_withLCA | shortcontigname | clusterLCA | clusterLCAcurated_contigcount | clusterLCAcurated_bioprojectcount | clusterLCAcurated_clustercount | shortclustername | cluster | clustersize | bioprojectsbycluster | bioproject | node | length | coverage | rel_abundance | taxname_lca_NTorNR | taxid_lca_NTorNR | taxoncategory_NTorNR | taxoncategorysimple_NTorNR | bits_NTorNR | evalue_NTorNR | viruscategory_NTorNR | viruscategorysimple_NTorNR | analysis_used | contig_name | lowcoverage_flag | target_title_NTorNR | target_NTorNR | taxid_NTorNR | gene_NTorNR | allele_NTorNR | pident_NTorNR | sumperc_cov_NTorNR | alnlen_NTorNR | mismatch_NTorNR | qcov_NTorNR | gapopen_NTorNR | qstart_NTorNR | qend_NTorNR | tstart_NTorNR | tend_NTorNR | sumalnlen_NTorNR | maxbits_NTorNR | bits_percmax_NTorNR | tax_superkingdom_NTorNR | tax_clade_NTorNR | tax_kingdom_NTorNR | tax_phylum_NTorNR | tax_class_NTorNR | tax_order_NTorNR | tax_family_NTorNR | tax_genus_NTorNR | tax_species_NTorNR | classification | taxname_lca_NTclustered | taxname_lca_NR | target_NTclustered | taxoncategory_NTclustered | taxoncategory_NR | taxoncategorysimple_NTclustered | taxoncategorysimple_NR | bits_NTclustered | bits_NR | evalue_NTclustered | evalue_NR |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 10071 | PRJNA556992_CONTIG_33478|Parvoviridae_sp.|CLUSTER2_Psittaciform_aveparvovirus|11|8 | Psittaciform aveparvovirus | Endogenous or not fish-associated | PRJNA556992_CONTIG_33478|Parvoviridae_sp. | PRJNA556992_CONTIG_33478 | Psittaciform aveparvovirus | 19 | 12 | 2 | CLUSTER2_Psittaciform_aveparvovirus|11|8 | PRJNA642647_P_NODE_4_length_3343_cov_14.130067_g3_i0|Psittaciform_aveparvovirus|NTclustered|0|NA | 11 | 8 | PRJNA556992 | 33478 | 601 | 4.880682 | 29.33289882 | Parvoviridae sp. | 1940570 | Viruses | Viruses | 300.0 | 1.69e-98 | Parvoviridae sp. | Non-phage | NR | PRJNA556992_P_NODE_33478_length_601_cov_4.880682_g31362_i0 | XNT21000.1 MAG: replication protein [Parvoviridae sp.] | XNT21000.1 | 1940570 | g31362 | i0 | 70.5 | 1.996672213 | 200 | 57 | 99.8 | 1 | 2 | 601 | 52 | 249 | 1200 | 300.0 | 1.0 | Viruses | Monodnaviria | Shotokuvirae | Cossaviricota | Quintoviricetes | Piccovirales | Parvoviridae | Parvoviridae sp. | Viruses;Monodnaviria;Shotokuvirae;Cossaviricota;Quintoviricetes;Piccovirales;Parvoviridae;Psittaciform aveparvovirus | Flumine parvovirus 11 | Parvoviridae sp. | gi|2235497401|gb|OM953996.1| | Viruses | Viruses | Viruses | Viruses | 255.0 | 300.0 | 4.22e-63 | 1.69e-98 |