viruses_fish_associated_curated: 10065
This data as json
| rowid | contig_withLCA_withcluster | clusterLCA_curated | Category | contig_withLCA | shortcontigname | clusterLCA | clusterLCAcurated_contigcount | clusterLCAcurated_bioprojectcount | clusterLCAcurated_clustercount | shortclustername | cluster | clustersize | bioprojectsbycluster | bioproject | node | length | coverage | rel_abundance | taxname_lca_NTorNR | taxid_lca_NTorNR | taxoncategory_NTorNR | taxoncategorysimple_NTorNR | bits_NTorNR | evalue_NTorNR | viruscategory_NTorNR | viruscategorysimple_NTorNR | analysis_used | contig_name | lowcoverage_flag | target_title_NTorNR | target_NTorNR | taxid_NTorNR | gene_NTorNR | allele_NTorNR | pident_NTorNR | sumperc_cov_NTorNR | alnlen_NTorNR | mismatch_NTorNR | qcov_NTorNR | gapopen_NTorNR | qstart_NTorNR | qend_NTorNR | tstart_NTorNR | tend_NTorNR | sumalnlen_NTorNR | maxbits_NTorNR | bits_percmax_NTorNR | tax_superkingdom_NTorNR | tax_clade_NTorNR | tax_kingdom_NTorNR | tax_phylum_NTorNR | tax_class_NTorNR | tax_order_NTorNR | tax_family_NTorNR | tax_genus_NTorNR | tax_species_NTorNR | classification | taxname_lca_NTclustered | taxname_lca_NR | target_NTclustered | taxoncategory_NTclustered | taxoncategory_NR | taxoncategorysimple_NTclustered | taxoncategorysimple_NR | bits_NTclustered | bits_NR | evalue_NTclustered | evalue_NR |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 10065 | PRJNA658611_CONTIG_2016|Flumine_parvovirus_18|CLUSTER2_Psittaciform_aveparvovirus|11|8 | Psittaciform aveparvovirus | Endogenous or not fish-associated | PRJNA658611_CONTIG_2016|Flumine_parvovirus_18 | PRJNA658611_CONTIG_2016 | Psittaciform aveparvovirus | 19 | 12 | 2 | CLUSTER2_Psittaciform_aveparvovirus|11|8 | PRJNA642647_P_NODE_4_length_3343_cov_14.130067_g3_i0|Psittaciform_aveparvovirus|NTclustered|0|NA | 11 | 8 | PRJNA658611 | 2016 | 440 | 1.949868 | 8.5794192 | Flumine parvovirus 18 | 2940900 | Viruses | Viruses | 243.0 | 3.1200000000000004e-79 | Flumine parvovirus 18 | Non-phage | NR | PRJNA658611_P_NODE_2016_length_440_cov_1.949868_g1973_i0 | UQB76439.1 nonstructural protein [Flumine parvovirus 18] | UQB76439.1 | 2940900 | g1973 | i0 | 80.8 | 0.995454545 | 146 | 28 | 99.5 | 0 | 2 | 439 | 67 | 212 | 438 | 243.0 | 1.0 | Viruses | Monodnaviria | Shotokuvirae | Cossaviricota | Quintoviricetes | Piccovirales | Parvoviridae | Flumine parvovirus 18 | Viruses;Monodnaviria;Shotokuvirae;Cossaviricota;Quintoviricetes;Piccovirales;Parvoviridae;Psittaciform aveparvovirus | Accipiter gentilis parvo-like hybrid virus | Flumine parvovirus 18 | gi|2015373255|gb|MW046576.1| | Viruses | Viruses | Viruses | Viruses | 73.1 | 243.0 | 3.27e-08 | 3.1200000000000004e-79 |