viruses_fish_associated_curated: 10029
This data as json
| rowid | contig_withLCA_withcluster | clusterLCA_curated | Category | contig_withLCA | shortcontigname | clusterLCA | clusterLCAcurated_contigcount | clusterLCAcurated_bioprojectcount | clusterLCAcurated_clustercount | shortclustername | cluster | clustersize | bioprojectsbycluster | bioproject | node | length | coverage | rel_abundance | taxname_lca_NTorNR | taxid_lca_NTorNR | taxoncategory_NTorNR | taxoncategorysimple_NTorNR | bits_NTorNR | evalue_NTorNR | viruscategory_NTorNR | viruscategorysimple_NTorNR | analysis_used | contig_name | lowcoverage_flag | target_title_NTorNR | target_NTorNR | taxid_NTorNR | gene_NTorNR | allele_NTorNR | pident_NTorNR | sumperc_cov_NTorNR | alnlen_NTorNR | mismatch_NTorNR | qcov_NTorNR | gapopen_NTorNR | qstart_NTorNR | qend_NTorNR | tstart_NTorNR | tend_NTorNR | sumalnlen_NTorNR | maxbits_NTorNR | bits_percmax_NTorNR | tax_superkingdom_NTorNR | tax_clade_NTorNR | tax_kingdom_NTorNR | tax_phylum_NTorNR | tax_class_NTorNR | tax_order_NTorNR | tax_family_NTorNR | tax_genus_NTorNR | tax_species_NTorNR | classification | taxname_lca_NTclustered | taxname_lca_NR | target_NTclustered | taxoncategory_NTclustered | taxoncategory_NR | taxoncategorysimple_NTclustered | taxoncategorysimple_NR | bits_NTclustered | bits_NR | evalue_NTclustered | evalue_NR |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 10029 | PRJNA168635_CONTIG_9512|clirnapec_virus_2|CLUSTER1_Fish-associated_picorna-like_virus_3|12|3 | Fish-associated picorna-like virus 3 | Endogenous or not fish-associated | PRJNA168635_CONTIG_9512|clirnapec_virus_2 | PRJNA168635_CONTIG_9512 | Fish-associated picorna-like virus 3 | 12 | 3 | 1 | CLUSTER1_Fish-associated_picorna-like_virus_3|12|3 | PRJEB64798_P_NODE_1247_length_1574_cov_19.076721_g909_i0|Fish-associated_picorna-like_virus_3|NR|4.87e-42|NA | 12 | 3 | PRJNA168635 | 9512 | 270 | 4.900452 | 13.2312204 | clirnapec virus 2 | 3368191 | Viruses | Viruses | 72.4 | 1.85e-12 | clirnapec virus 2 | Non-phage | NR | PRJNA168635_P_NODE_9512_length_270_cov_4.900452_g9097_i0 | XII42891.1 MAG: capsid protein, partial [clirnapec virus 201] | XII42891.1 | 3368194 | g9097 | i0 | 49.4 | 0.9 | 81 | 38 | 86.7 | 1 | 268 | 35 | 510 | 590 | 243 | 72.4 | 1.0 | Viruses | clirnapec virus 201 | Viruses;Riboviria;Orthornavirae;Pisuviricota;Pisoniviricetes;Picornavirales;Fish-associated picorna-like virus 3 | clirnapec virus 2 | Viruses | Viruses | 72.4 | 1.85e-12 |