viruses_fish_associated_curated: 10006
This data as json
| rowid | contig_withLCA_withcluster | clusterLCA_curated | Category | contig_withLCA | shortcontigname | clusterLCA | clusterLCAcurated_contigcount | clusterLCAcurated_bioprojectcount | clusterLCAcurated_clustercount | shortclustername | cluster | clustersize | bioprojectsbycluster | bioproject | node | length | coverage | rel_abundance | taxname_lca_NTorNR | taxid_lca_NTorNR | taxoncategory_NTorNR | taxoncategorysimple_NTorNR | bits_NTorNR | evalue_NTorNR | viruscategory_NTorNR | viruscategorysimple_NTorNR | analysis_used | contig_name | lowcoverage_flag | target_title_NTorNR | target_NTorNR | taxid_NTorNR | gene_NTorNR | allele_NTorNR | pident_NTorNR | sumperc_cov_NTorNR | alnlen_NTorNR | mismatch_NTorNR | qcov_NTorNR | gapopen_NTorNR | qstart_NTorNR | qend_NTorNR | tstart_NTorNR | tend_NTorNR | sumalnlen_NTorNR | maxbits_NTorNR | bits_percmax_NTorNR | tax_superkingdom_NTorNR | tax_clade_NTorNR | tax_kingdom_NTorNR | tax_phylum_NTorNR | tax_class_NTorNR | tax_order_NTorNR | tax_family_NTorNR | tax_genus_NTorNR | tax_species_NTorNR | classification | taxname_lca_NTclustered | taxname_lca_NR | target_NTclustered | taxoncategory_NTclustered | taxoncategory_NR | taxoncategorysimple_NTclustered | taxoncategorysimple_NR | bits_NTclustered | bits_NR | evalue_NTclustered | evalue_NR |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 10006 | PRJNA1005695_CONTIG_249|Rocky_Mountain_birnavirus|CLUSTER1_Rocky_Mountain_birnavirus|12|6 | Rocky Mountain birnavirus | Known | PRJNA1005695_CONTIG_249|Rocky_Mountain_birnavirus | PRJNA1005695_CONTIG_249 | Rocky Mountain birnavirus | 19 | 7 | 2 | CLUSTER1_Rocky_Mountain_birnavirus|12|6 | PRJNA792582_P_NODE_184_length_2652_cov_192.750679_g112_i0|Rocky_Mountain_birnavirus|NTclustered|0|NA | 12 | 6 | PRJNA1005695 | 249 | 2633 | 56.79375 | 1495.379438 | Rocky Mountain birnavirus | 3077841 | Viruses | Viruses | 4800.0 | 0.0 | Rocky Mountain birnavirus | Non-phage | NTclustered | PRJNA1005695_P_NODE_249_length_2633_cov_56.793750_g153_i0 | Rocky Mountain birnavirus isolate RMBV/2020/Utah/USA segment B, complete sequence | gi|2582975581|gb|OR427290.1| | 3077841 | g153 | i0 | 99.582 | 1.052791493 | 2632 | 11 | 99.0 | 0 | 1 | 2632 | 2632 | 1 | 2772 | 4800.0 | 1.0 | Viruses | Riboviria | Orthornavirae | Birnaviridae | Rocky Mountain birnavirus | Viruses;Riboviria;Orthornavirae;Birnaviridae;Rocky Mountain birnavirus | Rocky Mountain birnavirus | Rocky Mountain birnavirus | gi|2582975581|gb|OR427290.1| | Viruses | Viruses | Viruses | Viruses | 4800.0 | 1659.0 | 0.0 | 0.0 |