run_metadata: 74601
This data as json
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|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 74601 | SRR23867233 | SRX19679362 | SRS17048758 | SRP427360 | PRJNA944406 | Protective mechanisms of a microbial oil against hypercholesterolemia: evidence from a zebrafish model | PRJNA944406 | Other | We investigated the alterations in the intestinal transcriptome of zebrafish offered DHA and EPA rich microbial oil in the diet. | HC 2 1 | Treatment:Treatment 2|replicate:biological replicate 2|read:forward read|strain:Wild type|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:laboratory|age:1 year|dev stage:Adult|sex:male|tissue:Intestine|collected by:Adnan Gora|collection date:2021 09|BioSampleModel:Model organism or animal | RNA Seq of zebrafish | D211 1 | D211 1 | PCR enrichment of adaptor ligated DNA | RNA-Seq | TRANSCRIPTOMIC | PolyA | PAIRED | ILLUMINA | Illumina NovaSeq 6000 | SRP427360 | D211_1.fq.gz D211_2.fq.gz | fastq fastq | 6332032200.0 | 21106774.0 | D211 1.fq.gz | 0:150 1:150 | A:1743782138;C:1425201935;G:1430924725;T:1731800503;N:322899 | 150 | 150 | 1743782138 | 1425201935 | 1430924725 | 1731800503 | 322899 | SRX19679362 | SRS17048758 | SRA1604081 | Nord University|Faculty of Bioscience and Aquaculture | Nord University | 2 | 0.93226 | 0.93204 | 0.08016 | 0.08032 | 0.74324 | 0.74286 | 0.54021 | 0.5371 | 150 | 150 | B | B | biological fallback assumption | illumina | novaseq_era | unknown | poly_a | unknown | bulk | unknown | unknown | Norway | 2023-03-17 | Adult | Adult | Gut | Digestive System |